Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5 230 6e-55
seq15 125 2e-23
>seq5
Length=571131
Score = 230 bits (254), Expect = 6e-55
Identities = 708/1075 (66%), Gaps = 55/1075 (5%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || || ||| | ||||| ||| |||||||| |||| || || || ||||| |||
Sbjct 297928 TTTACTCATGCCTCTCCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCT 297987
Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | |||||||| || || ||||||||||| | ||||| | || |
Sbjct 297988 TG-TTTCTTGGTCGCCATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGA 298046
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|||||| | |||||||| | ||| || || |||||| || ||||| || ||||| |
Sbjct 298047 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 298106
Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATG 363780
||| | ||||||| || ||| || ||| || || ||| | ||||||||
Sbjct 298107 ----AACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGGTTAATTCCCATG 298161
Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838
||||||| ||| | ||||| || | || |||||||||||||| | |||| | |
Sbjct 298162 ATTCGTGTTTTTAATAATACCGCCCGTTATGTCGACCAGGGTGGTAACAAAAGACC--TG 298219
Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898
| || |||||| |||| || || || ||||| ||||| ||||| ||| |||| ||
Sbjct 298220 GTGCCTTTGCTCTGTACCTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATCA 298279
Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958
| || ||| || ||||| ||| | |||||| | ||| |||| ||| || ||| ||
Sbjct 298280 GAAAGAACCACGGTAAAGAAGAAATTCGTGCAAGAGATTTGTTTCCTGCTCTGTGGATTC 298339
Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018
|||| | ||| |||||||| || || | | || |||| | | || | ||| |
Sbjct 298340 CTGATCTTTTCATGAAGCGTGTCGAAGAGAATGGGACTTGGACTTTGTTCTCTCCAACAG 298399
Query 364019 AATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077
||| ||||| ||| ||| | |||||||| | || |||||||| ||
Sbjct 298400 CCGCTCCCGGTCTAAGCGACTGT-TACGGTGACGAGTTTGAAGCTCTATATACCCGCTAC 298458
Query 364078 GAATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCAT 364136
||| | ||| | | | ||||||| ||| || || || |||||| | |||| |
Sbjct 298459 GAA----AAAGAAGGTCGTGGTAAGACCATTAAAGCTCAAAAATTATGGTATTCCATTTT 298514
Query 364137 GGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAA 364196
||| | || | ||| || || ||||| | | || | || |||||| | |||||| | ||
Sbjct 298515 GGAAGCACAAACTGAAACGGGTACACCTTTTGTGGTTTATAAAGATGCTTGCAACAGAAA 298574
Query 364197 GTCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTA 364252
||| ||||| | || | ||| ||| ||| || ||| |||| || |||
Sbjct 298575 GTCTAACCAAAAAAACTTGGGTGTTATCAAGTCATCA----AACTTATGCTGTGAAATTG 298630
Query 364253 TTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGG 364312
|||| ||| | ||||| ||||| ||||| || |||||| | || || | || | || |
Sbjct 298631 TTGAGTACTCAGCTCCGGACGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTGCCAG 298690
Query 364313 CGT---TTGTAA------AAGATGG---TACTTTTGACCACCAGCATC-----TTTATGA 364355
||| ||| || | || || |||| | || || | || ||| |
Sbjct 298691 CGTTCATTGAAACGTCAGAGGACGGCCAAACTTCT-ACTTACAACTTCAAAAAATTA-CA 298748
Query 364356 CGTAA---CCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412
|| || || | || |||| | ||| | ||| ||||| || ||||| || ||
Sbjct 298749 CGAAATTGCCAAAGTTGTTACTCGTAATTTAAACAGAGTTATTGATCGTAATTACTACCC 298808
Query 364413 AATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGG 364471
|| |||| |||| | || |||||| | ||| | || |||| | ||||| || |
Sbjct 298809 TGTTGAAGAAG-CGAGAAGATCCAATATGAGACATAGACCAATTGCCTTGGGTGTTCAAG 298867
Query 364472 GCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTC 364531
| | |||||| ||||||| |||| | | |||||||| || || ||| | |
Sbjct 298868 GTTTAGCTGACACTTTTATGTTGCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTAC 298927
Query 364532 TAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586
|||||| | || ||||||||||| ||| |||| | ||| ||||| |||||
Sbjct 298928 TAAATATCCAAATATTTGAAACAATTTATCATGCCTCCATGGAAGCTTCTTGTGA 298982
>seq15
Length=1049886
Score = 125 bits (138), Expect = 2e-23
Identities = 210/299 (70%), Gaps = 10/299 (3%)
Strand=Plus/Minus
Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477
||| || |||||||| || |||||||| ||||| | ||||||| || ||| || | |
Sbjct 445357 TGTTAAGATTTGGGACGGTAATGGATCCCGTGAATATCTAGATA-AGATGGGGTTCACAG 445299
Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537
| | ||| || ||| | || || ||||| ||||| |||||| | || || |||||
Sbjct 445298 ATAGAAAAGTGGGGGATTTAGGGCCCGTTTATGGATTCCAATGGAGGCATTTCGGTGCTA 445239
Query 111538 ACTACAAAACC----ATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAAT 111593
| ||||| ||| ||| |||||| ||| | |||||| | ||||||||| || |
Sbjct 445238 AATACAAGACCTGTGATG-ACGACT---ATGCTGGACAGGGTATTGATCAATTGAAGCAG 445183
Query 111594 GTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAAC 111653
|||||| || || | |||| || || | | | | |||||||||||||| |||||
Sbjct 445182 GTCATTCATAAACTAAAGACAAATCCTTATGATAGAAGAATTATTATGAGTGCTTGGAAT 445123
Query 111654 CCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712
||| || || || || ||||| | |||||||| || || | | || ||||||||
Sbjct 445122 CCAGCTGATTTTGACAAGATGGCTTTGCCACCATGCCACATTTTCTCACAATTTTATGT 445064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353316113294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |