Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq12 152 4e-32
seq9 100 2e-16
>seq12
Length=1029308
Score = 152 bits (168), Expect = 4e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| ||||| ||||||| ||| | || ||| | || || || | |
Sbjct 66311 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 66252
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | ||||| ||| ||| ||||||||||| || ||||| || |||
Sbjct 66251 GACACTATTGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 66192
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|||||| |||||| | ||| |||||||| ||||||| ||||| | | ||| || |||
Sbjct 66191 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGAACCTTGTCCGACTACAAC 66132
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| |||||||| || || | ||||||||||||||| | ||||| ||
Sbjct 66131 ATCCAAAAAGAGTCCACTTTACATTTAGTGTTAAGACTAAGAGGTGG 66085
Score = 147 bits (162), Expect = 2e-30
Identities = 182/244 (75%), Gaps = 5/244 (2%)
Strand=Plus/Minus
Query 23977 TTTAGCCAA-ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATC 24035
|||| | || ||| |||||| | ||||| || || || || || ||| | || || |
Sbjct 66782 TTTAACTAAGACATTATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTG 66723
Query 24036 GAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGC 24095
|||||||| | || ||||| || | ||||| ||| ||| |||||||||||
Sbjct 66722 GAAGTCGAATCTTCTGATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGT 66663
Query 24096 ATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-A 24154
|| ||||| || |||||||| |||||| | ||| |||||||| ||||||| |||| |
Sbjct 66662 ATTCCTCCAGACCAACAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACA 66603
Query 24155 C-GTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAG 24213
| ||| | ||||||||||||| ||||||||||| | ||||||||| | ||||||||||
Sbjct 66602 CTGTCTG--ATTATAACATTCAGAAAGAATCTACCTTGCATTTAGTGCTGAGATTGAGAG 66545
Query 24214 GAGG 24217
| ||
Sbjct 66544 GTGG 66541
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || || | ||||| || | ||||| | || ||||| | |
Sbjct 66539 ATGCAGATCTTTGTCAAGACGCTGACTGGTAAGACTATTACTCTGGAGGTCGAATCTTCC 66480
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | ||||| ||| ||| || || ||||| || ||||| || |||
Sbjct 66479 GACACGATCGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 66420
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169
|||||| |||||| | ||| || ||||| ||||||| ||||| ||| | | ||||| ||
Sbjct 66419 CAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGCAGAA-CGTTATCCGATTACAA 66361
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| || ||||| |||| || || || ||||||||||| ||
Sbjct 66360 TATTCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 66313
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | ||||| || | || ||| |||| ||||| | |
Sbjct 66083 ATGCAGATCTTCGTTAAGACGCTGACTGGTAAGACAATAACCCTCGAGGTCGAATCTTCC 66024
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | ||||| ||| ||| || || ||||| || || || || |||
Sbjct 66023 GACACTATTGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCACCAGACCAA 65964
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|||||| |||||| | || || ||||| ||||||| ||||| | | ||| || |||
Sbjct 65963 CAGAGATTGATTTTTGCTGGTAAACAACTGGAAGATGGCAGAACCTTGTCCGACTACAAC 65904
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| |||||||| | || | || ||||| ||||| || ||
Sbjct 65903 ATTCAAAAGGAATCTACTCTCCACCTGGTCTTAAGGTTGAGGGGTGG 65857
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||| |||||| | || || || || ||||| || || | |||||| | ||||| || |
Sbjct 475465 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATC 475524
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
||||| || || | ||||| ||||| ||||| ||||| || || || ||
Sbjct 475525 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGA 475584
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
||||| ||| |||| | | || |||||| | ||||||| ||||| | | || ||
Sbjct 475585 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTA 475644
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| ||||| ||||| || | || || || || ||||||||||| ||
Sbjct 475645 CAACATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 475695
>seq9
Length=431692
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059
||||| || || || ||||| || | || || | ||||| || | ||||| ||
Sbjct 62720 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 62779
Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119
|| | ||||| ||||||| ||||| ||||| || || || || ||||| ||| ||
Sbjct 62780 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 62839
Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179
|| | | || |||||| | ||||| | |||| | | || || ||||||||||||
Sbjct 62840 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 62899
Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| || | || ||||| || ||||||||||| ||
Sbjct 62900 GAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGG 62937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935910922635
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |