Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq12 116 3e-21 >seq12 Length=1029308 Score = 116 bits (128), Expect = 3e-21 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 131025 CACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGC-GCGAGTCCT 131083 ||||||||||| || ||||| ||||| |||||||| ||| || ||| | || | || | Sbjct 66102 CACTAAATGTAAAGTGGACTCTTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCA-TCTT 66160 Query 131084 CTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGG 131143 | || ||||| || || | || || | ||| ||||| ||||| || ||||||||||| Sbjct 66161 CCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCTTTGTC-C 66219 Query 131144 TGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 ||| ||| || ||||| | || | ||| |||| || || | || | ||| | ||| Sbjct 66220 TGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTT 66279 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || ||||||||||| || ||||| ||||| Sbjct 66280 TTGCCAGTTAGAGTTTTGACAAAAATTTGCAT 66311 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | |||||||||||| | ||| || || || |||||||| ||||| | Sbjct 66541 CCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCAGAC 66600 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || || || ||||| || || | || || | ||| ||||| ||||| Sbjct 66601 AGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGA 66660 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| ||| ||| || ||||| | || | ||||| | || |||| Sbjct 66661 ATACCTTCTTTGTC-CTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGAC 66719 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | |||||||||||| | ||| || || ||||| ||||| Sbjct 66720 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 66767 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGC-GCGAGTCCTCTAGCTGCTTGCC 131096 || || ||||||||||||||||| ||| || ||| | || | || || || || || || Sbjct 65887 GTAGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTGCCA-TCTTCCAGTTGTTTACC 65945 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTG-CT 131155 || | || || | ||| ||||| || || || ||||| || || ||| ||| || || Sbjct 65946 AGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTATC-TTGAATTTTTGACT 66004 Query 131156 TGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAG 131215 ||| | || | ||| |||| || |||| |||| ||| | || ||||| || || | Sbjct 66005 TGACGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATTGTCTTACCAGTCAGCG 66064 Query 131216 TTTTTACGAAAATCTGCAT 131234 | || ||||| |||||||| Sbjct 66065 TCTTAACGAAGATCTGCAT 66083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012699697280