Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq10 132 5e-26 >seq10 Length=707288 Score = 132 bits (146), Expect = 5e-26 Identities = 493/751 (66%), Gaps = 40/751 (5%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||||| || |||| | ||||||||||| || ||||| || | Sbjct 371669 CATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTACCAGC 371610 Query 92850 CAAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903 |||||| || | ||| || || || || || | | | || || || ||| | || Sbjct 371609 CAAAGAGAT-GTTTTCCATAAAGTCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTAC 371551 Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961 ||| |||| ||| | ||| ||||| || || || | ||| || ||| | || Sbjct 371550 CGAAGGCAAC-----CAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 371496 Query 92962 ACAATTCATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGA 93017 | ||||| ||||| ||| | || |||| ||||| |||||| |||||| | | | Sbjct 371495 AGCGTTCATACCTAGCAAGGCA-ACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAA 371440 Query 93018 TTACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTA 93071 || | || || || | | |||| | || || ||| ||| |||||| || | Sbjct 371439 TTTCCACAGCCTCGGTGACAATTTTT-----TCAACAATTGCTGGGTCTGGTTTGTTCTT 371385 Query 93072 CGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCA 93131 | | || | ||| |||||| ||||||||||| || ||||||||||||| | |||| Sbjct 371384 CAA-ATGGGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCA 371326 Query 93132 ACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAG 93191 | || || ||| || |||||||| | || |||| ||||| | ||| || || || | Sbjct 371325 ATTCGTTAGAGAAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGG 371266 Query 93192 CAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAA 93251 | || ||| || || || | |||||| | | ||||| || || | | ||| ||| Sbjct 371265 CGAAGGAACCGGAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAA 371206 Query 93252 AATTTGCGGAATTACTGCTG-ATCCATTTTAAAGCCCAATCGG-CTTTTTTCTTAATACA 93309 | ||| | | || |||||| ||| |||||| |||| ||| | | | | | Sbjct 371205 ACAAGGCGTCA-GCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCT 371147 Query 93310 AGG-TAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATG 93368 || ||||| | || || || || | | | || | || | | || ||||| | Sbjct 371146 GGGATAGTG--TGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGATGTAGG 371089 Query 93369 TATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGT 93428 ||||||| || | || || |||||||||| | ||| || || |||||||| || | Sbjct 371088 TATCGATCAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCAT 371029 Query 93429 AGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCAT 93488 |||||| | || || | || || ||||| || || | || || | ||||||| Sbjct 371028 AGAAACTCTTTGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCAT 370969 Query 93489 TGACTATACCATCGGATGCTGCaaaaaaaGC 93519 | || ||||| || || || || ||||| || Sbjct 370968 TAACAATACCGTCAGAAGCGGCGAAAAAGGC 370938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860681667080