Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq10 132 5e-26
>seq10
Length=707288
Score = 132 bits (146), Expect = 5e-26
Identities = 493/751 (66%), Gaps = 40/751 (5%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| |||||||| || |||| | ||||||||||| || ||||| || |
Sbjct 371669 CATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTACCAGC 371610
Query 92850 CAAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903
|||||| || | ||| || || || || || | | | || || || ||| | ||
Sbjct 371609 CAAAGAGAT-GTTTTCCATAAAGTCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTAC 371551
Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961
||| |||| ||| | ||| ||||| || || || | ||| || ||| | ||
Sbjct 371550 CGAAGGCAAC-----CAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 371496
Query 92962 ACAATTCATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGA 93017
| ||||| ||||| ||| | || |||| ||||| |||||| |||||| | | |
Sbjct 371495 AGCGTTCATACCTAGCAAGGCA-ACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAA 371440
Query 93018 TTACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTA 93071
|| | || || || | | |||| | || || ||| ||| |||||| || |
Sbjct 371439 TTTCCACAGCCTCGGTGACAATTTTT-----TCAACAATTGCTGGGTCTGGTTTGTTCTT 371385
Query 93072 CGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCA 93131
| | || | ||| |||||| ||||||||||| || ||||||||||||| | ||||
Sbjct 371384 CAA-ATGGGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCA 371326
Query 93132 ACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAG 93191
| || || ||| || |||||||| | || |||| ||||| | ||| || || || |
Sbjct 371325 ATTCGTTAGAGAAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGG 371266
Query 93192 CAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAA 93251
| || ||| || || || | |||||| | | ||||| || || | | ||| |||
Sbjct 371265 CGAAGGAACCGGAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAA 371206
Query 93252 AATTTGCGGAATTACTGCTG-ATCCATTTTAAAGCCCAATCGG-CTTTTTTCTTAATACA 93309
| ||| | | || |||||| ||| |||||| |||| ||| | | | | |
Sbjct 371205 ACAAGGCGTCA-GCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCT 371147
Query 93310 AGG-TAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATG 93368
|| ||||| | || || || || | | | || | || | | || ||||| |
Sbjct 371146 GGGATAGTG--TGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGATGTAGG 371089
Query 93369 TATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGT 93428
||||||| || | || || |||||||||| | ||| || || |||||||| || |
Sbjct 371088 TATCGATCAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCAT 371029
Query 93429 AGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCAT 93488
|||||| | || || | || || ||||| || || | || || | |||||||
Sbjct 371028 AGAAACTCTTTGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCAT 370969
Query 93489 TGACTATACCATCGGATGCTGCaaaaaaaGC 93519
| || ||||| || || || || ||||| ||
Sbjct 370968 TAACAATACCGTCAGAAGCGGCGAAAAAGGC 370938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860681667080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |