Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq12 149 5e-31
seq9 107 2e-18
>seq12
Length=1029308
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | |||||| || |||||||||| || || |||||||| |||||||| |||
Sbjct 66082 ATACCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCTTTTTGGATGTTGTAGTCG 66141
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || | |||||| ||||| ||||| || | || | | ||||||||| |||
Sbjct 66142 GACAAGGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGA 66201
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||||||||| ||| ||| || | | |||| ||||||| |||||
Sbjct 66202 GGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCA 66261
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | |||||||| || |||||||| |||||||| |||||
Sbjct 66262 ACCTCTAGGGTTATAGTTTTGCCAGTTAGAGTTTTGACAAAAATTTGCAT 66311
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | ||||| |||||||| | ||||||||||| |||||||| |||||
Sbjct 66538 ATACCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCA 66597
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || | | |||||| ||||| ||||| || | || | | ||||||||| |||
Sbjct 66598 GACAGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGA 66657
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||||||||| ||| ||| || | | |||| ||| || | ||||||
Sbjct 66658 GGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCG 66717
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| ||||||| ||| || |||||||| |||||
Sbjct 66718 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 66767
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|||||||| |||||||||||||| ||| || || | |||||| ||||||||||||
Sbjct 65887 GTAGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTGCCATCTTCCAGTTGTTTACCA 65946
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| | || | | ||||||||| || ||||| ||||| || || ||| ||| ||
Sbjct 65947 GCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTTGACTTG 66006
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||||||| |||||||| || | ||| | || || || ||||| ||
Sbjct 66007 ACGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATTGTCTTACCAGTCAGCGTC 66066
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 66067 TTAACGAAGATCTGCAT 66083
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | |||||| || || || | ||||| || |||||||| |||||||||
Sbjct 66310 ATACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATATTGTAATCG 66369
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | |||||| ||||||||||| || | || | | ||||||||| |||
Sbjct 66370 GATAACGTTCTGCCATCTTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGA 66429
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| || || ||| ||| || | | || | ||||||| ||||||
Sbjct 66430 GGAATACCTTCCTTATCTTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCG 66489
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || || ||||| || || ||||| ||||||||
Sbjct 66490 ACCTCCAGAGTAATAGTCTTACCAGTCAGCGTCTTGACAAAGATCTGCAT 66539
>seq9
Length=431692
Score = 107 bits (118), Expect = 2e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | |||||| ||||| |||| || |||||||||||||||||||| ||
Sbjct 62940 ATACCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCA 62881
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || | | ||||| | ||| |||||||| |||| | | |||||||| ||
Sbjct 62880 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 62821
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| ||||| ||||||| || | | |||| ||||| | |||||
Sbjct 62820 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 62761
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
|| |||| || | || || || |||| ||| || ||||||
Sbjct 62760 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 62719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134312953404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |