Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq12 149 5e-31 seq9 107 2e-18 >seq12 Length=1029308 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | |||||| || |||||||||| || || |||||||| |||||||| ||| Sbjct 66082 ATACCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCTTTTTGGATGTTGTAGTCG 66141 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | |||||| ||||| ||||| || | || | | ||||||||| ||| Sbjct 66142 GACAAGGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGA 66201 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| ||| ||| || | | |||| ||||||| ||||| Sbjct 66202 GGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCA 66261 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | |||||||| || |||||||| |||||||| ||||| Sbjct 66262 ACCTCTAGGGTTATAGTTTTGCCAGTTAGAGTTTTGACAAAAATTTGCAT 66311 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||||| |||||||| | ||||||||||| |||||||| ||||| Sbjct 66538 ATACCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCA 66597 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | |||||| ||||| ||||| || | || | | ||||||||| ||| Sbjct 66598 GACAGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGA 66657 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| ||| ||| || | | |||| ||| || | |||||| Sbjct 66658 GGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCG 66717 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| ||||||| ||| || |||||||| ||||| Sbjct 66718 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 66767 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 |||||||| |||||||||||||| ||| || || | |||||| |||||||||||| Sbjct 65887 GTAGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTGCCATCTTCCAGTTGTTTACCA 65946 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || | | ||||||||| || ||||| ||||| || || ||| ||| || Sbjct 65947 GCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTTGACTTG 66006 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| |||||||| || | ||| | || || || ||||| || Sbjct 66007 ACGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATTGTCTTACCAGTCAGCGTC 66066 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 66067 TTAACGAAGATCTGCAT 66083 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | |||||| || || || | ||||| || |||||||| ||||||||| Sbjct 66310 ATACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATATTGTAATCG 66369 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | |||||| ||||||||||| || | || | | ||||||||| ||| Sbjct 66370 GATAACGTTCTGCCATCTTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGA 66429 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| || || ||| ||| || | | || | ||||||| |||||| Sbjct 66430 GGAATACCTTCCTTATCTTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCG 66489 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || ||||| || || ||||| |||||||| Sbjct 66490 ACCTCCAGAGTAATAGTCTTACCAGTCAGCGTCTTGACAAAGATCTGCAT 66539 >seq9 Length=431692 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | |||||| ||||| |||| || |||||||||||||||||||| || Sbjct 62940 ATACCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCA 62881 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | ||||| | ||| |||||||| |||| | | |||||||| || Sbjct 62880 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 62821 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||||| || | | |||| ||||| | ||||| Sbjct 62820 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 62761 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 || |||| || | || || || |||| ||| || |||||| Sbjct 62760 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 62719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134312953404