Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq14 127 5e-24 seq12 87.8 4e-12 >seq14 Length=769158 Score = 127 bits (140), Expect = 5e-24 Identities = 172/240 (72%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 334115 AGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATC 334174 || ||||| ||||| || || | |||||||||||| ||| | || | |||| Sbjct 592360 AGACATGTCAGAATGGGTGTTATCAATATCGTGTTCCACATAAACGGTGCGACACTCATC 592301 Query 334175 CGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACC 334234 || |||||| || || | ||| || || |||||| ||||| ||||| ||||| || Sbjct 592300 TTGAGTGGGGAAGCCATCGACCTGGCCATTAGCAATAGATCGCATTAGAGTAGATTTTCC 592241 Query 334235 CGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATT 334294 || || ||||| ||||| ||||| || | | || ||||| | | || | || || Sbjct 592240 GGCACCATTTGGGCCACATAGACCATATCTTCTACCTCGCTTTAACCTCAATTGAGTCTT 592181 Query 334295 GTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||| || |||||||| |||||||||||| ||||||||||| | ||||| ||| ||||| Sbjct 592180 GTTTAGCAGAATTTTGGCACCATATGCCAAGGAAAATTCACAGTTACACAAATCTTCACC 592121 >seq12 Length=1029308 Score = 87.8 bits (96), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 334182 GGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCG 334241 ||||| || |||| |||||||| ||||||| | ||| | ||| || ||||| ||| Sbjct 609502 GGGAAACCATCAACTTGACCGTTAGCAATAGCTCTCATTAAAGTGGACTTACCACAACCG 609443 Query 334242 TTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGA 334301 ||||| ||||| | ||| || | | | | ||||| | || | || || |||| Sbjct 609442 TTTGGACCACAGATACCATATCTTCTAGCTCTCTTCAATCTTAATTGGGTCTTATTCAAC 609383 Query 334302 AGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 | ||||| |||| || |||| |||||||||||| | ||| ||||| ||||| Sbjct 609382 AAGATTTTAGCACCGTAAGCCAAAGAAAATTCACAGTTACATAGATCTTCACC 609330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879759778950