Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5 205 1e-47 >seq5 Length=571131 Score = 205 bits (226), Expect = 1e-47 Identities = 811/1269 (64%), Gaps = 24/1269 (2%) Strand=Plus/Minus Query 113959 TGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGC 114018 ||| ||||| || ||||| | |||||| ||||||| ||||| || || ||||| ||||| Sbjct 299205 TGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGATGCGGTAGGCATTGGTGC 299146 Query 114019 CATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTC 114078 |||| | ||| | | ||| | || | | || || | | | | |||||| || Sbjct 299145 CATGGTCAAAGAGTTTCTAATACCATGTTTCATGATATCTTTCCTCAAAGTGTCCCAATC 299086 Query 114079 GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGG 114138 | || | | | | ||||||||| ||||| || |||||||| || ||||| Sbjct 299085 CCACATGCCGTAGGGTTTTTGATCCCACATATCGAACTGAAGTATACCTTGAGAAGCTGG 299026 Query 114139 CGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAG 114198 || || | || || ||||||||||| || | || | ||| | || || | Sbjct 299025 AGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCAT 298966 Query 114199 GGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC 114258 || || ||||| ||||| ||||| || | ||| | | |||||| || ||||| Sbjct 298965 GGAGGCATGATAAATTGTTTCAAATATTTGGATATTTAGTAAACGGGCCTCTTCAGAATC 298906 Query 114259 AAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGG 114318 ||| | | || ||| ||||| || || | |||||| ||||| | | ||||||| Sbjct 298905 AAAGGGTAAACGTAGCAACATAAAAGTGTCAGCTAAACCTTGAACACCCAAGGCAATTGG 298846 Query 114319 GCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAAC 114378 | |||||||||||| || ||| || || || || || |||| | ||| ||||| Sbjct 298845 TCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAAC 298786 Query 114379 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT 114438 || |||| ||| || ||||| || | ||||| || | |||| | | | || | Sbjct 298785 TCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTAAGT 298726 Query 114439 GCGAGTCT---CTTCAT-TGACAT--------ACTTAGGAAGGGCGATTGACGCCAGATT 114486 ||| | | || | |||| | || || | ||| | || |||| || Sbjct 298725 AGAAGTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGGCAAGGCAACGGAAGCCAAGTT 298666 Query 114487 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 114546 ||| |||| || || ||| | | | |||||| | |||||| || || ||||| Sbjct 298665 ACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTTGATGA 298606 Query 114547 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 114606 ||| || |||||||| ||||| || |||||| |||| || ||||| || |||| || Sbjct 298605 CTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCTTTATAAACCAC 298546 Query 114607 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGG 114666 | || || ||||| || ||||| | | | ||| | | ||| | | ||| Sbjct 298545 AAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAATTTTTGAGCT-- 298488 Query 114667 CACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTC 114726 | ||| || | || || || | ||||| || || || ||||||||||| || Sbjct 298487 -TTAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAACTCGTC 298429 Query 114727 ACC--CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 114784 ||| || | | || ||| || || || ||| |||| | || ||| ||| Sbjct 298428 ACCGTAACAGTCGCTTAGA--CCGGGAGCGGCTGTTGGAGAGAACAAAGTCCAAGTCCCA 298371 Query 114785 CCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGA 114844 ||| || |||||||||||||| || || || ||||| ||||| | || | ||| | Sbjct 298370 TTCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCACAGAGCAGGAAACAAATCTCTT 298311 Query 114845 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 114904 ||| |||||| | || || || | | || | ||| || | |||||| || Sbjct 298310 GCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAGATATCAGCA 298251 Query 114905 TGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCTGGTTTAC 114960 ||||| ||||||||||||| || | | ||| ||| | |||| |||||| || Sbjct 298250 TGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTG-TTACCACCCTGGTCGAC 298192 Query 114961 ATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATT 115020 ||| | || || |||||| || |||| ||| ||||| | || | ||| || || Sbjct 298191 ATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAAGTACCGTT 298132 Query 115021 TGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCC 115080 ||| || ||| ||| | | | | | | |||||| || | ||||||||| || Sbjct 298131 TGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACC 298072 Query 115081 TGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTC 115140 || || || || || || || | | | || |||| || || ||||| ||||| Sbjct 298071 AGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTC 298012 Query 115141 ACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAA 115200 |||| | |||| | ||| || |||||||| || |||| |||||||| || || Sbjct 298011 CTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAA 297952 Query 115201 GAGGGTTGG 115209 | ||||| Sbjct 297951 CAAAGTTGG 297943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353473062360