Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq9 197 2e-45
seq5 194 2e-44
>seq9
Length=431692
Score = 197 bits (218), Expect = 2e-45
Identities = 791/1233 (64%), Gaps = 38/1233 (3%)
Strand=Plus/Plus
Query 116064 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 116123
|||||| ||||| || || ||||| | || ||||| || || || || || |||
Sbjct 226388 CCACATGTCAAATTGTAGAATACCCTTAGAGGCTGGAGAACCTTCGAAAGTGGAATACTT 226447
Query 116124 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 116183
|| || || |||||||| || || || || | || ||||| || || || ||
Sbjct 226448 ACCTTCCTTCTGTGCCAATTCACAGGAGGCTTCAAGAGTAGCATGATAGATGGTTTCGAA 226507
Query 116184 AATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAA 116243
||| | |||| | | || || || || ||||| | ||||| ||| ||| |
Sbjct 226508 AATCTGTTTGTTCAAAGTTTGAGCTTCTTCCGATTCAAAGGGTAGACGCAACATCATATA 226567
Query 116244 TACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCG 116303
||| || |||||||| ||||| | | |||| || | ||| ||||||| || ||||
Sbjct 226568 GGTATCGGCCAGACCTTGAACACCCAAGGCAATAGGTCTATGCTTCATATTTGAATTTCT 226627
Query 116304 AGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC 116363
|| || |||||| |||| | |||||| || || || | || | ||| | ||
Sbjct 226628 GGCTTCAGGAACTGGATAATAATTACGATCGATGACTCTGTTCAAGTTATGGGTAATTAC 226687
Query 116364 CTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT------CTTCA----- 116412
|| | |||||||| | | ||| ||| | |||| ||| | |||||
Sbjct 226688 TTTAGCAATTTCATGTAAACTCTCGAAATTATAACTTGCAGTTTTACCATCTTCAGACAT 226747
Query 116413 -TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 116471
| |||| | || ||||| || || || |||||||| || | ||| |||||
Sbjct 226748 CTCGACAAATGCTGGGAGGGCAATAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGA 226807
Query 116472 AGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 116531
| ||||| | ||||| ||||||||| || |||||||| |||||||||| |||
Sbjct 226808 GGAATACTCGACGATTTCACAACACAAATTGGATGATTTAATGGTACCCAAGTTCTGTTG 226867
Query 116532 ATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTG 116591
|||| |||| | ||||| | |||||||| | ||| | || || || || || |||||
Sbjct 226868 GTTTGTCTTTCTATTACATGAGTCCTTGTAAACCATGAAAGGTGTACCTGTTTCTGTTTG 226927
Query 116592 GGACTTG-AGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT 116650
| |||| | ||| || | ||||| | ||| | | ||| || | || || |
Sbjct 226928 TG-CTTGTAAAATTGCATACCATAACTTTTGGGC---CTTAATGGTTTTACCACGACCTT 226983
Query 116651 CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCC---ACAGCCTCTGAGAGCC 116707
|| ||||| || || || | ||||| || |||||| ||| | ||| | |
Sbjct 226984 CCCTTTCGTAACGGGTATATAGCTCTTCAAATTCATCACCCCAGACATCATCTAAA---C 227040
Query 116708 CTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 116767
|||| || | ||| | || | || ||| | ||| |||| | ||| || ||||| |
Sbjct 227041 CTGGGGCAGCACTGGGAGAAAATAAAGTCCAGGGCCCATCCTCTTGAACACGTTTCATAA 227100
Query 116768 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 116827
| ||||| || ||||| || || | ||| | ||||| || |||||| | || |
Sbjct 227101 AAAGGTCAGGAATCCACAGAGCAGGGAACAAATCCCTTGCACGGATTTCTTCTTTACCAT 227160
Query 116828 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 116887
| | | | || | |||||| | |||||| || ||||| ||||||| | | | |
Sbjct 227161 GGGTTTTTCTAATATCGACAAAGTCGAAGATATCTGCATGCCATGGTTCCAAGAAAAGGG 227220
Query 116888 CGATTGACCC------CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAA 116941
| | | || |||| || || |||| ||||| | || || ||| |
Sbjct 227221 CAAAGGCGCCAGGTCTCTTGTTACCTCCT---TGGTCCACATAACGAGCAGTATTGTTGA 227277
Query 116942 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCC-CGA-ATACGAGA 116999
| || || | ||| ||||| | |||| || || || || || ||| ||| || |
Sbjct 227278 AAACACGGATCATAGGAATCAACCCATTTGAAGTACCGTTGGTACCGGCGATATAAGA-A 227336
Query 117000 CTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 117059
| ||| || | || | || || || | ||||| ||| ||||| ||| || ||
Sbjct 227337 CCTGT-GGAACGGATGTTGTTAATATGAAGACCAACACCACCTGCAGTCTTGGAAATCAT 227395
Query 117060 TGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAG 117119
|| || || | | | | | || || || || || |||||| |||| | || || ||
Sbjct 227396 AGCACATTCTTTCAAAGTATCATAAATACCTTCAATAGAGTCATCCTTCATGGCAATTAG 227455
Query 117120 GAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 117179
||| || |||||||| || ||| |||||||||||||| | |||||| | |||||
Sbjct 227456 GAAACATGAAGACATTTGGGGATGTGGAGTACCAGCGTTGAATAAGGTTGGGGAAGCGTG 227515
Query 117180 GATGAACATACCTT-GGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCC 117238
|||| ||| ||| |||||| || |||||||| || ||||| ||| || |
Sbjct 227516 AGTGAA-ATATCTTAACGACATCAAATTGTAGGTCTTCAGCACAGACTCAATATCACTAC 227574
Query 117239 CGTGAATACCGATTGAGACCCGCATAAACATGT 117271
|||| ||||| | | || ||||||| || ||
Sbjct 227575 CGTGGATACCCAGCGCCACACGCATAACCAAGT 227607
>seq5
Length=571131
Score = 194 bits (214), Expect = 2e-44
Identities = 821/1287 (64%), Gaps = 26/1287 (2%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|| ||||||| || ||| ||||| || ||||| | |||||| ||||||| ||||||
Sbjct 299222 TACATGTTGGAGGTAACTGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGAT 299163
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| || ||||| ||||||||| | ||| | | ||| | | || || |
Sbjct 299162 GCGGTAGGCATTGGTGCCATGGTCAAAGAGTTTCTAATACCATGTTTCATGATATCTTTC 299103
Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082
| | | |||||| || | || | | | ||||||||||| ||||| ||
Sbjct 299102 CTCAAAGTGTCCCAATCCCACATGCCGTAGGGTTTTTGATCCCACATATCGAACTGAAGT 299043
Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142
|||||||| || ||||| || || | || || || |||||||| || | || | |
Sbjct 299042 ATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAGT 298983
Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 116202
|| | || || | || || ||||| ||||| ||||| || | ||| | |
Sbjct 298982 TCACAAGAAGCTTCCATGGAGGCATGATAAATTGTTTCAAATATTTGGATATTTAGTAAA 298923
Query 116203 TTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGG 116262
|||||| || |||||||| | | ||| ||| ||||| || || | ||||||
Sbjct 298922 CGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACATAAAAGTGTCAGCTAAACCTTGA 298863
Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAA 116322
||||| | | ||||||| | |||||||||||| || ||| || || || || ||
Sbjct 298862 ACACCCAAGGCAATTGGTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGGGTAG 298803
Query 116323 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 116382
|||| | ||| ||||| || |||| ||| || ||||| || | ||||| || |
Sbjct 298802 TAATTACGATCAATAACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAAT 298743
Query 116383 TTTTCGTAATCAAAACTGCGAGTCT---CTTCAT-TGACAT--------ACTTAGGAAGG 116430
|||| | | | || | ||| | | || | |||| | || || | |
Sbjct 298742 TTTTTGAAGTTGTAAGTAGAAGTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGGCAAG 298683
Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490
|| | || |||| ||||| |||| || || ||| | | | |||||| | ||||||
Sbjct 298682 GCAACGGAAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCA 298623
Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| || ||||| ||| || |||||||| ||||| || |||||| |||| ||
Sbjct 298622 CAGCATAAGTTTGATGACTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAA 298563
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
||||| || || | || | | || || ||||| || ||||| | | | ||| | | |
Sbjct 298562 GCATCTTTATAAACCACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATAC 298503
Query 116611 CATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 116670
|||| | ||| | ||| || | || || || | ||||| || ||
Sbjct 298502 CATAATTTTTGAGCT---TTAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATAT 298446
Query 116671 AGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGA 116728
|| || |||||||| ||||| |||| | || ||| || || || |||| |||
Sbjct 298445 AGAGCTTCAAACTCGTCACCGTAACAGTCGCTTAGA--CCGGGAGCGGCTGTTGGAGAGA 298388
Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788
| | || ||| ||| ||| || || ||||||||||| || || || ||||| || |
Sbjct 298387 ACAAAGTCCAAGTCCCATTCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCACAGAG 298328
Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848
| | || | ||| | ||| |||||| | || || || | | || | ||
Sbjct 298327 CAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAA 298268
Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGA 116904
| || | |||||| || ||||| ||||||||||||| || | | ||| ||| |
Sbjct 298267 AATCAAAGATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTG- 298209
Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964
|||| |||||| ||||| | || || ||||| || |||| ||| ||||| |
Sbjct 298208 TTACCACCCTGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAAC 298149
Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGAT 117023
|| | ||| || ||||| || ||| || || ||| | | | | |||||
Sbjct 298148 CCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTT-GAACGAATGTTATGGAT 298090
Query 117024 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTA 117083
|| | ||||||||| || || || || || || || || | | | || ||||
Sbjct 298089 ATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTA 298030
Query 117084 GATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT 117143
|| || ||||| ||||| |||| | |||| | ||| || |||||||| || |
Sbjct 298029 AATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTT 297970
Query 117144 TGGTGTACCAGCGTTGAAGAGGGTTGG 117170
||| |||||||| || || | |||||
Sbjct 297969 TGGAGTACCAGCATTAAACAAAGTTGG 297943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507069629720
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