Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 262 5e-65 seq9 147 3e-30 >seq5 Length=571131 Score = 262 bits (290), Expect = 5e-65 Identities = 840/1283 (65%), Gaps = 54/1283 (4%) Strand=Plus/Plus Query 111720 CCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCA 111779 ||||| | || || |||||||| |||| ||| ||||||||| ||||||| | | || Sbjct 297943 CCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCC 298002 Query 111780 AACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCA 111839 | |||||||| || ||| | || ||||||| |||| | | |||||||| || || Sbjct 298003 ATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCC 298062 Query 111840 AAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTAT 111898 || ||||||||||| || | || |||||| | | | | ||| || || || Sbjct 298063 AAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC-AACTGGTTCTTACAT 298121 Query 111899 TAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCAC 111958 | |||||||| ||| || | || | ||||| ||| |||| || ||||| || Sbjct 298122 TGCTGGTACAAACGGTACTTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAATAC 298181 Query 111959 AGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCT 112012 || || ||||| |||| | ||| | ||| || || | || | || || Sbjct 298182 CGCCCGTTATGTCGACCAGGGTGG---TAACAAAAGACCTGGTGCCTTTGCTCTGTACCT 298238 Query 112013 TGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGA 112072 || |||||||| || |||||| | || || |||| | | ||||| ||| | || Sbjct 298239 GGAACCATGGCATGCTGATATCTTTGATTTTATTGATATCAGAAAGAACCACGGTAAAGA 298298 Query 112073 GGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGA 112131 || || ||| | ||| | || | ||||| |||||||| ||||| ||||||||| Sbjct 298299 AGAAATTCG-TGCAAGAGATTTGTTTCCTGCTCTGTGGATTCCTGATCTTTTCATGAAGC 298357 Query 112132 GAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAG-GCACCCGGTCTCTCC 112190 | || || |||| ||| | |||| || | || | |||| ||| || |||||||| | Sbjct 298358 GTGTCGAAGAGAATGGGACTTGGACTTTGTTCTCTCCA-ACAGCCGCTCCCGGTCTAAGC 298416 Query 112191 GATGCCGTG--GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGG 112248 || | || ||||| ||||||||||| || || || ||||| ||||| |||| | Sbjct 298417 GA--CTGTTACGGTGACGAGTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGGTCGTG 298474 Query 112249 CGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGA 112308 | ||| | |||| | | ||| | | ||| | | | ||||| || | Sbjct 298475 ---GTAAGACCATTAAAGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAA 298531 Query 112309 CTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATT 112368 | |||||||| | | || |||| ||||| || || ||| |||| ||| ||||| || | Sbjct 298532 CGGGTACACCTTTTGTGGTTTATAAAGATGCTTGCAACAGAAAGTCTAACCAAAAAAACT 298591 Query 112369 TGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATG 112428 ||||||| |||||| || ||| | || ||||| | || | ||| || | Sbjct 298592 TGGGTGTTATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAGTACTCAGCTCCGGACG 298651 Query 112429 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--ATGTGGATC--CAGA- 112483 | || ||||| |||||| | || || | || | || || || || | | |||| Sbjct 298652 AAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTGCCAGCGTTCAT-TGAAACGTCAGAG 298710 Query 112484 ----GACAAA----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACA 112535 | |||| || | | | ||||| | |||||| || | ||| ||| || Sbjct 298711 GACGGCCAAACTTCTACTTACAACTTCAAAAAATTACACGAAATTGCCAAAGTTGTTACT 298770 Query 112536 AAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCT 112595 || ||||||||||||||||| | |||| ||||| ||||| || | | ||| Sbjct 298771 CGTAATTTAAACAGAGTTATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAGATCC 298830 Query 112596 AATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCA-TTCT 112654 ||||||||||| | ||||||| | ||||| |||||| | || || || || | Sbjct 298831 AATATGAGACATAGACCAATTGCCTTGGGTGTTCAAGGTTTAGCTGA------CACTTTT 298884 Query 112655 TTGTCGCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTT 112709 ||| || ||| | |||||||| || || || | | ||| | |||||| Sbjct 298885 ATGTTGCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTACTAAATATCCAAATATTT 298944 Query 112710 GAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCA 112769 || ||||| ||||| ||| | | || || || || | || | || || ||| Sbjct 298945 GAAACAATTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAAAAGGACGGCCCA 299004 Query 112770 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 112829 || |||||||| | |||||||||||||| ||||| | ||||| || |||||||||| | Sbjct 299005 TACGAAACCTTCCAAGGTTCTCCAGCTTCTCAAGGTATACTTCAGTTCGATATGTGGG-A 299063 Query 112830 GGTGAGACCAAGCTTCA-CTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGG 112888 | ||| | || | || |||||| || | | | || |||| | | | || Sbjct 299064 TCAAAAACCCTACGGCATGTGGGATTGGGACACTTTGAGGAAAGATATCATGAAACATGG 299123 Query 112889 TCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 | || | ||| ||||| |||||||||||||| || || ||||| | ||||| ||| Sbjct 299124 TATTAGAAAC--TCTTTGACCATGGCACCAATGCCTACCGCATCCACATCCCAAATATTG 299181 Query 112947 GGTAATAATGAATGCTTTGAACC 112969 ||| |||||||||| |||||||| Sbjct 299182 GGTTATAATGAATGTTTTGAACC 299204 >seq9 Length=431692 Score = 147 bits (162), Expect = 3e-30 Identities = 928/1463 (63%), Gaps = 66/1463 (5%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605 |||||||| ||||||| | ||| || | | ||||||| | |||| || Sbjct 227680 TATTTTGGGTTCAAGACTTTGGAGCGTTCGTATTTGCTAAGACTGAACGGTGAAGTGGCT 227621 Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 ||| |||||| || || | ||||| || ||| | |||||||| || |||||||| Sbjct 227620 GAACGGCCACAGCACTTGGTTATGCGTGTGGCGCTGGGTATCCACGGTAGTGATATTGAG 227561 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGT---GGTATGTTCATCCACGCAACACCA 111722 ||||| || |||| ||| | |||||| || | ||| |||| ||||| | ||| Sbjct 227560 TCTGTGCTGAAGACCTACAATTTGATGTC--GTTAAGATAT-TTCACTCACGCTTCCCCA 227504 Query 111723 ACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAAC 111782 ||| | |||||||||||||| ||| ||||||||||| |||||||| ||||| | Sbjct 227503 ACCTTATTCAACGCTGGTACTCCACATCCCCAAATGTCTTCATGTTTCCTAATTGCCATG 227444 Query 111783 AAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAG 111842 ||||| || || || | || ||||| | ||| | | |||||||| || || ||| Sbjct 227443 AAGGATGACTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAG 227384 Query 111843 TGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAG 111901 || |||||| | || | || || | | || | || ||| | ||| ||| Sbjct 227383 ACTGCAGGTGGTGTTGGTCTTCATATTAACAACATCCGTTCC-ACAGGTTCTTATATCGC 227325 Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 ||||| || ||| ||| |||| | ||||| ||| | || || || ||| || || Sbjct 227324 CGGTACCAACGGTACTTCAAATGGGTTGATTCCTATGATCCGTGTTTTCAACAATACTGC 227265 Query 111962 GCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGT-----CTATCTT-GA 112015 || ||||| ||||| || || |||| || || ||| | | |||| || Sbjct 227264 TCGTTATGTGGACCAA---GGAGGTAACAAGAGACCTGGCGCCTTTGCCCTTTTCTTGGA 227208 Query 112016 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGA 112075 |||||||| || |||||| | || || | || | | | ||| ||| | || || Sbjct 227207 ACCATGGCATGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGA 227148 Query 112076 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 112134 | |||| | ||| | ||| | ||||| |||||||| || || || ||||| | | Sbjct 227147 -AATCCGTGCAAGGGATTTGTTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTG 227089 Query 112135 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATG 112194 || | ||| ||| ||| || | |||| ||| || || ||| | |||| Sbjct 227088 TTCAAGAGGATGGGCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATG 227029 Query 112195 CCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTG 112254 | |||||| || ||||||| || || || ||||| ||| |||| | | Sbjct 227028 TCTGGGGTGATGAATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTG---GTA 226972 Query 112255 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGT 112313 || | || | | ||| | || ||| | |||| | ||||| || || ||| Sbjct 226971 AAACCATTAAGGCCCAAAAGTTATGGTATGCAATTTTACAAG-CACAAACAGAAACAGGT 226913 Query 112314 ACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 112373 ||||| | ||| ||||||| ||| | ||||| ||||| || ||| |||| |||||| Sbjct 226912 ACACCTTTCATGGTTTACAAGGACTCATGTAATAGAAAGACAAACCAACAGAACTTGGGT 226853 Query 112374 GTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 112433 || || ||||| | ||| |||||| | || | | | | |||||| || Sbjct 226852 ACCATTAAATCATCCAATTTGTGTTGTGAAATCGTCGAGTATTCCTCCCCAGATGAAACC 226793 Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GAC-AAAGA 112491 || || ||||| || || || || || ||||| || || || || ||| | | |||| Sbjct 226792 GCCGTTTGTAATCTAGCCTCTATTGCCCTCCC--AGCATTTG--TCGAGATGTCTGAAGA 226737 Query 112492 -----------CA---TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAA 112537 || | | ||| || | | || ||| || | ||| | || | Sbjct 226736 TGGTAAAACTGCAAGTTATAATTTCGAGAGTTTACATGAAATTGCTAAAGTAATTACCCA 226677 Query 112538 AAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAA 112597 ||| | |||||||| || ||| | |||| ||| || ||| || | || || || Sbjct 226676 TAACTTGAACAGAGTCATCGATCGTAATTATTATCCAGTTCCTGAAGCCAGAAATTCAAA 226617 Query 112598 TATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTG 112657 ||||| || | || |||| | ||||| |||||||| || ||| | || | | Sbjct 226616 TATGAAGCATAGACCTATTGCCTTGGGTGTTCAAGGTCTGGCCGATACCTATATGATGTT 226557 Query 112658 TCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAAT 112717 || | | ||||| || || ||||| | | || | || || || || || Sbjct 226556 GCGTCTACCCTTTGAATCGGAAGAAGCTCAAACTTTGAACAAACAGATTTTCGAAACCAT 226497 Query 112718 GTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAAC 112777 ||||| || ||||||| || | || |||||| || || ||| ||| || Sbjct 226496 CTATCATGCTACTCTTGAAGCCTCCTGTGAATTGGCACAGAAGGAAGGTAAGTATTCCAC 226437 Query 112778 CTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGAC 112837 || || ||||||||||| || | || | || |||||||| |||||| | | | || | Sbjct 226436 TTTCGAAGGTTCTCCAGCCTCTAAGGGTATTCTACAATTTGACATGTGGAACGCTAAG-C 226378 Query 112838 CAAGCTTCACTA----CGACTGGGACGCTCTCAAGGAACG-CA---TCAAGGAGAAGGGT 112889 || || || || ||||| ||| ||| || | || |||| | | || | Sbjct 226377 CA---TTTGGTATGTGGGATTGGGA-AATCTTAAGAAAGGACATTGTCAA--ACATGGAT 226324 Query 112890 CTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTG 112946 | | ||| ||||| ||||| ||||||||||| ||||| || | |||| ||||| Sbjct 226323 -TAAGAAAC--TCTTTAACAATGGCGCCAATGCCAACTGCCTCGACTTCTCAAATTCTTG 226267 Query 112947 GGTAATAATGAATGCTTTGAACC 112969 ||| |||| ||||| |||||||| Sbjct 226266 GGT-ATAACGAATGTTTTGAACC 226245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742268092240