Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5 136 5e-27 >seq5 Length=571131 Score = 136 bits (150), Expect = 5e-27 Identities = 771/1222 (63%), Gaps = 26/1222 (2%) Strand=Plus/Minus Query 109917 ATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTA 109976 |||||||||||| ||||||| ||| | || ||| |||||||| | ||| | ||||| Sbjct 299064 ATCCCACATATCGAACTGAAGTATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTA 299005 Query 109977 CGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTC 110036 | || || | || | || | ||||| || | | |||||||| || || || Sbjct 299004 TGGGCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATTGTTTC 298945 Query 110037 AAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAAT 110096 ||| || || ||| | | || | ||||||| | || ||||| | || | || Sbjct 298944 AAATATTTGGATATTTAGTAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACAT 298885 Query 110097 AAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCG 110156 ||| || |||| ||| |||||||| | |||| || | ||| |||| || || | Sbjct 298884 AAAAGTGTCAGCTAAACCTTGAACACCCAAGGCAATTGGTCTATGTCTCATATTGGATCT 298825 Query 110157 TCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCAC 110216 || || ||| || ||||| | || || || || || | || | ||| || || Sbjct 298824 TCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAACTCTGTTTAAATTACGAGTAAC 298765 Query 110217 AGTCTTCGTGATTTCATGGAGTTT------GTCGTAA-TCGAACGTTTT--CGTCTCCTT 110267 | || | ||||| || | ||| || |||| | ||| |||| |||| || Sbjct 298764 AACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTAAGTAGAA-GTTTGGCCGTCCTCTG 298706 Query 110268 A--TTGACATATTTG--GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTT 110323 | || || | || | |||| || || | || || |||| ||| ||||| Sbjct 298705 ACGTTTCAATGAACGCTGGCAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCGTCCG 298646 Query 110324 TGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCT 110383 | | ||| || | |||||| || ||||| || ||| || ||||||||||| | Sbjct 298645 GAGCTGAGTACTCAACAATTTCACAGCATAAGTTTGATGACTTGATAACACCCAAGTTTT 298586 Query 110384 TCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCG 110443 | || || || || |||||| ||||| ||||| | || | || ||||| ||||| | Sbjct 298585 TTTGGTTAGACTTTCTGTTGCAAGCATCTTTATAAACCACAAAAGGTGTACCCGTTTCAG 298526 Query 110444 TCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGAC 110503 | |||| | | ||||| | ||||| | || | || ||| | ||| Sbjct 298525 TTTGTGCTTCCAAAATGGAATACCATAATTTTTGAGCTTTAATGGTC---TTACCACGAC 298469 Query 110504 CTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACA-TCAGAAAGA 110562 |||| | ||||| ||| || | | ||||| || | ||||| ||| || ||| Sbjct 298468 CTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAACTCGTCACCGTA-ACAGTCGCTTAGA 298410 Query 110563 CCCTTCGCCT-TGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCAT 110621 || || ||| || | |||| | | |||| | ||| ||| || || | |||||| Sbjct 298409 CCGGGAGCGGCTGTTGG-AGAGAACAAAGTCCAAGTCCCATTCTCTTCGACACGCTTCAT 298351 Query 110622 GAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACC 110681 ||| || ||||||||||||| || | || | || | |||| ||||| | ||| Sbjct 298350 GAAAAGATCAGGAATCCACAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACC 298291 Query 110682 TTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGAC 110741 ||||| | | || | ||| || | |||||| | ||||||||||| || || | Sbjct 298290 GTGGTTCTTTCTGATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTACAG 298231 Query 110742 AGCGATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797 ||| | || || ||| | ||| |||||| ||||| || || || ||| | Sbjct 298230 AGCAAAGGCACCAGGTCTTTTG-TTACCACCCTGGTCGACATAACGGGCGGTATTATTAA 298172 Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857 | || | | ||| ||||| | || | || ||| |||||||| ||| || Sbjct 298171 AAACACGAATCATGGGAATTAACCCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAAC 298112 Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917 | | | |||||||| |||||||| | |||||||||||| || || ||| | Sbjct 298111 CAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAG 298052 Query 110918 CACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 |||| ||| | | || | |||||||| || || || || |||| |||| | | | Sbjct 298051 CACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGA 297992 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 | ||||| ||||| ||||| || || || ||||| || | || || | |||||| Sbjct 297991 AACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGTTGGAGAGGCATGAG 297932 Query 111038 TGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGT 111097 | || | | ||||| ||| ||||| || || || | | ||| |||||| Sbjct 297931 TAAAGTATTTTAGAGACATTAAGTTATATGTTTCTAGAGCAGCTTCGATGTCTCTACCGT 297872 Query 111098 GAATACCAATGGCAACTCGCAT 111119 | || || | || |||| ||| Sbjct 297871 GGATGCCCAGTGCGACTCTCAT 297850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975874842600