Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq5 307 1e-78
seq9 242 4e-59
seq10 82.4 9e-11
>seq5
Length=571131
Score = 307 bits (340), Expect = 1e-78
Identities = 905/1381 (66%), Gaps = 34/1381 (2%)
Strand=Plus/Minus
Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012
|||||||| |||||||||| |||||| ||||| | ||||| || || ||||||||||||
Sbjct 299204 GGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGATGCGGTAGGCATTGGTGCC 299145
Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGT 106070
|| ||||| ||| | || ||| | || | |||| || | | | | ||||| |
Sbjct 299144 ATGGTCAAAGA--GTTTCTAATACCATGTTTCATGATATCTTTCCTCAAAGTGTCCCAAT 299087
Query 106071 CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGG 106130
| | || | || || ||||||||||| || ||||| | ||||| || | |
Sbjct 299086 CCCACATGCCGTAGGGTTTTTGATCCCACATATCGAACTGAAGTATACCTTGAGAAGCTG 299027
Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190
||||||| | || || || || | || | || ||| | |||||| || ||||
Sbjct 299026 GAGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCA 298967
Query 106191 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 106250
||| || ||||| || |||||||| || | ||| | ||| || || ||||
Sbjct 298966 TGGAGGCATGATAAATTGTTTCAAATATTTGGATATTTAGTAAACGGGCCTCTTCAGAAT 298907
Query 106251 CAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAG 106310
|||| | | || ||| ||||| || || | ||||||||||||||| |||| |
Sbjct 298906 CAAAGGGTAAACGTAGCAACATAAAAGTGTCAGCTAAACCTTGAACACCCAAGGCAATTG 298847
Query 106311 GTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGA 106370
|||| |||| |||||| || ||| ||| ||||| || || |||| | ||||| |
Sbjct 298846 GTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAA 298787
Query 106371 CTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCA-----TAAT 106424
||| ||||| ||| ||||||| || | ||||| || || ||||| | |||
Sbjct 298786 CTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTAAG 298727
Query 106425 CAAAAGT---GCGAGTCTC------TTCATTGACATACTTTGGAAGGGCGATTGATGCCA 106475
| |||| || ||| |||| ||| || ||| | ||| | || ||||
Sbjct 298726 TAGAAGTTTGGCCGTCCTCTGACGTTTCAATGA---ACGCTGGCAAGGCAACGGAAGCCA 298670
Query 106476 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGG 106535
| || |||||||| || || ||| | ||| |||||| | |||||| || ||||| |
Sbjct 298669 AGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTTG 298610
Query 106536 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGA 106595
| ||| || ||||| || ||||||||| |||| ||||||| ||||| || || |
Sbjct 298609 ATGACTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCTTTATAAA 298550
Query 106596 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGG 106655
|| | || || ||||| || || |||| | | ||| | | ||| | || |
Sbjct 298549 CCACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATA-ATTTTTG- 298492
Query 106656 CTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 106715
| | ||||| || | || || || ||||| || || || ||||||||||
Sbjct 298491 -AGCTTTAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAACT 298433
Query 106716 CCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCATTGA 106774
| ||||| |||| ||||| || || ||| |||| |||| | || |||
Sbjct 298432 CGTCACCGTAACAGTCGCTTAGACCGGGAGCGGCTGT-TGGAGAGAACAAAGTCCAAGTC 298374
Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834
||| ||| || || |||||||||||||| || ||||||||||| | | ||| | ||||
Sbjct 298373 CCATTCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCACAGAGCAGGAAACAAATCT 298314
Query 106835 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 106894
|| ||| ||||| | ||| ||||| || | |||| || || | ||||||
Sbjct 298313 CTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAGATATCA 298254
Query 106895 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATT 106950
|| |||||||| || || || | || | | || |||| | ||| | || |
Sbjct 298253 GCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTG-TTACCACCCTGGTC 298195
Query 106951 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 107010
||||| || || || ||||| || |||| ||| ||||| | || | || |||
Sbjct 298194 GACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAAGTACC 298135
Query 107011 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 107070
||||| || ||| ||| | | | | | | |||||| || | ||||||||
Sbjct 298134 GTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACC 298075
Query 107071 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 107130
||||| || || || ||||| || | | ||| | || ||||| | ||| ||
Sbjct 298074 ACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGA 298015
Query 107131 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 107190
||||||||| |||||| | ||| ||| |||||| || ||| |||| |||||||||||
Sbjct 298014 GTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATT 297955
Query 107191 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTCTCCA 107249
|| | ||||| | || ||| | || || || | ||||| || ||||| || |
Sbjct 297954 AAACAAAGTTGGAGAGGCATGAGT-AAAGTATTTTAGAGACATTAAGTTATATGTTTCTA 297896
Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309
||| || |||||| ||||||||||| | || || | ||||| | || ||| |
Sbjct 297895 GAGCAGCTTCGATGTCTCTACCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTGTG 297836
Query 107310 G 107310
|
Sbjct 297835 G 297835
>seq9
Length=431692
Score = 242 bits (268), Expect = 4e-59
Identities = 899/1382 (65%), Gaps = 50/1382 (4%)
Strand=Plus/Plus
Query 105953 GGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGTTGGCATTGGTGC 106011
|||||||| ||||| |||| |||||||| |||| | || ||||| ||||||||||| ||
Sbjct 226245 GGTTCAAAACATTCGTTAT-ACCCAAGAATTTGAGAAGTCGAGGCAGTTGGCATTGGCGC 226303
Query 106012 CATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCA 106068
||| ||||| ||| | | || | || ||| | || ||| ||| |||||
Sbjct 226304 CATTGTTAAAGA--GTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAAGATT-TCCCA 226360
Query 106069 GTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGAC 106126
|| | | | | ||| || | |||| |||| |||||||| || | || | ||
Sbjct 226361 ATCCCACAT-ACCAAATGGCTTAGCGTTCC-ACATGTCAAATTGTAGAATACCCTTAGAG 226418
Query 106127 GTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAG--CCAATTCACAGCTCG 106184
| |||||||| || || || ||| ||||| |||| | ||||||||||| |
Sbjct 226419 GCTGGAGAACCTTCGAAAGTGGAATACTTACCTTC--CTTCTGTGCCAATTCACAGGAGG 226476
Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244
| || || | || ||||| |||||||| || || | |||| | ||||| |
Sbjct 226477 CTTCAAGAGTAGCATGATAGATGGTTTCGAAAATCTGTTTGTTCAAAGTTTGAGCTTCTT 226536
Query 106245 CTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303
| || ||||| | |||| ||| || ||| | ||| || |||||||||||||||||
Sbjct 226537 CCGATTCAAAGG-GTAGACGCAACATCATATAGGTATCGGCCAGACCTTGAACACCCAAG 226595
Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTG 106363
|||||||||| || |||||| || |||| || ||| |||||| |||| |
Sbjct 226596 GCAATAGGTCTATGCTTCATATTTGAATTTCTGGCTTCAGGAACTGGATAATAATTACGA 226655
Query 106364 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAA 106423
|| ||||||| ||| | || | ||||| | || | |||||||| | | || ||
Sbjct 226656 TCGATGACTCTGTTCAAGTTATGGGTAATTACTTTAGCAATTTCATGTAAACTCTCGAAA 226715
Query 106424 TCAAAAGTGCGAGTCT------CTTCA------TTGACATACTTTGGAAGGGCGATTGAT 106471
| | || | ||| | ||||| | |||| | ||| ||||| || ||
Sbjct 226716 TTATAACTTGCAGTTTTACCATCTTCAGACATCTCGACAAATGCTGGGAGGGCAATAGAG 226775
Query 106472 GCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAG 106531
|| | ||| ||||| || || ||||| | ||||| | ||||| ||||||
Sbjct 226776 GCTAGATTACAAACGGCGGTTTCATCTGGGGAGGAATACTCGACGATTTCACAACACAAA 226835
Query 106532 TTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTG 106591
||||| ||||| || ||||| |||| |||||| ||||| | || || | ||||||
Sbjct 226836 TTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTATTACATGAGTCCTTG 226895
Query 106592 TAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG-AGAATTGCCTTCCACA-CAT 106649
|| | |||| | || || || || || || |||| |||| | |||||| | ||| | | |
Sbjct 226896 TAAACCATGAAAGGTGTACCTGTTTCTGTTTGTG-CTTGTAAAATTGCATACCATAACTT 226954
Query 106650 CGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTT 106709
| | || ||||| || | || || ||| ||||| || || || |||
Sbjct 226955 TTGGGCCTT----AATGGTTTTACCACGACCTTCCCTTTCGTAACGGGTATATAGCTCTT 227010
Query 106710 CAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACC 106769
|||| || |||||| | || | |||||| || ||| | || | || ||
Sbjct 227011 CAAATTCATCACCCCAGACATCATCTAAACCTGGGGCAGCACTGGGAGAAAATAAAGTCC 227070
Query 106770 ATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 106829
| | ||| |||| | ||| || ||||| |||||||| ||||||||||| | | || |
Sbjct 227071 AGGGCCCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGCAGGGAACA 227130
Query 106830 GATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATG 106888
||| || ||| || ||||| | ||| ||| | || | || | || || | |
Sbjct 227131 AATCCCTTGCACGGATT-TCTTCTTTACCATGGGTTTTTCTAATATCGACAAAGTCGAAG 227189
Query 106889 ATATCCGCGTGCCATGGCTC-AAGATAG-----ACTGCGATAGATCCCTTTCGACGCCCA 106942
||||| || |||||||| || |||| | | ||| || || ||| || ||
Sbjct 227190 ATATCTGCATGCCATGGTTCCAAGAAAAGGGCAAAGGCGCCAGGTCTCTTGTTACCTCC- 227248
Query 106943 GCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCT 107002
||| | ||||| || || || ||| || || || | ||| ||||| | |||| |
Sbjct 227249 --TTGGTCCACATAACGAGCAGTATTGTTGAAAACACGGATCATAGGAATCAACCCATTT 227306
Query 107003 GATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATC 107062
|| ||| || || || ||| ||| ||| | | | | || || |
Sbjct 227307 GAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATGAAGA 227366
Query 107063 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 107122
|||| ||| || || ||| || || ||||| || | | ||| |||| |||||
Sbjct 227367 CCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCT 227426
Query 107123 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 107182
| || ||||| ||||| |||| || ||||| || ||||| || || ||| |||
Sbjct 227427 TCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGTGGAGTA 227486
Query 107183 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTGTCGTA 107241
||||| ||||| | |||||| | |||||| |||| ||| ||| |||||| | |||
Sbjct 227487 CCAGCGTTGAATAAGGTTGGGGAAGCGTGAGTGAA-ATATCTTAACGACATCAAATTGTA 227545
Query 107242 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301
|||| || ||||| ||||| || |||||||| || | ||||||||||||| ||
Sbjct 227546 GGTCTTCAGCACAGACTCAATATCACTACCGTGGATACCCAGCGCCACACGCATAACCAA 227605
Query 107302 GT 107303
||
Sbjct 227606 GT 227607
>seq10
Length=707288
Score = 82.4 bits (90), Expect = 9e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||| | ||| || |||| | |||| | ||| || |||||| | |||
Sbjct 371362 GCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTCAAACCT 371303
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393
||||| | ||| | |||||||||||| |||| | | ||| || ||||||||||||| |
Sbjct 371302 GGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGACA 371243
Query 117394 CCCTCCACACACGCAAACGC 117413
|| || | | | ||||| ||
Sbjct 371242 CCTTCGATAGAAGCAAAGGC 371223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980674629080
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