Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 307 1e-78 seq9 242 4e-59 seq10 82.4 9e-11 >seq5 Length=571131 Score = 307 bits (340), Expect = 1e-78 Identities = 905/1381 (66%), Gaps = 34/1381 (2%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 |||||||| |||||||||| |||||| ||||| | ||||| || || |||||||||||| Sbjct 299204 GGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGATGCGGTAGGCATTGGTGCC 299145 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGT 106070 || ||||| ||| | || ||| | || | |||| || | | | | ||||| | Sbjct 299144 ATGGTCAAAGA--GTTTCTAATACCATGTTTCATGATATCTTTCCTCAAAGTGTCCCAAT 299087 Query 106071 CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGG 106130 | | || | || || ||||||||||| || ||||| | ||||| || | | Sbjct 299086 CCCACATGCCGTAGGGTTTTTGATCCCACATATCGAACTGAAGTATACCTTGAGAAGCTG 299027 Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190 ||||||| | || || || || | || | || ||| | |||||| || |||| Sbjct 299026 GAGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCA 298967 Query 106191 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 106250 ||| || ||||| || |||||||| || | ||| | ||| || || |||| Sbjct 298966 TGGAGGCATGATAAATTGTTTCAAATATTTGGATATTTAGTAAACGGGCCTCTTCAGAAT 298907 Query 106251 CAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAG 106310 |||| | | || ||| ||||| || || | ||||||||||||||| |||| | Sbjct 298906 CAAAGGGTAAACGTAGCAACATAAAAGTGTCAGCTAAACCTTGAACACCCAAGGCAATTG 298847 Query 106311 GTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGA 106370 |||| |||| |||||| || ||| ||| ||||| || || |||| | ||||| | Sbjct 298846 GTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAA 298787 Query 106371 CTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCA-----TAAT 106424 ||| ||||| ||| ||||||| || | ||||| || || ||||| | ||| Sbjct 298786 CTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTAAG 298727 Query 106425 CAAAAGT---GCGAGTCTC------TTCATTGACATACTTTGGAAGGGCGATTGATGCCA 106475 | |||| || ||| |||| ||| || ||| | ||| | || |||| Sbjct 298726 TAGAAGTTTGGCCGTCCTCTGACGTTTCAATGA---ACGCTGGCAAGGCAACGGAAGCCA 298670 Query 106476 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGG 106535 | || |||||||| || || ||| | ||| |||||| | |||||| || ||||| | Sbjct 298669 AGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTTG 298610 Query 106536 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGA 106595 | ||| || ||||| || ||||||||| |||| ||||||| ||||| || || | Sbjct 298609 ATGACTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCTTTATAAA 298550 Query 106596 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGG 106655 || | || || ||||| || || |||| | | ||| | | ||| | || | Sbjct 298549 CCACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATA-ATTTTTG- 298492 Query 106656 CTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 106715 | | ||||| || | || || || ||||| || || || |||||||||| Sbjct 298491 -AGCTTTAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAACT 298433 Query 106716 CCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCATTGA 106774 | ||||| |||| ||||| || || ||| |||| |||| | || ||| Sbjct 298432 CGTCACCGTAACAGTCGCTTAGACCGGGAGCGGCTGT-TGGAGAGAACAAAGTCCAAGTC 298374 Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834 ||| ||| || || |||||||||||||| || ||||||||||| | | ||| | |||| Sbjct 298373 CCATTCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCACAGAGCAGGAAACAAATCT 298314 Query 106835 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 106894 || ||| ||||| | ||| ||||| || | |||| || || | |||||| Sbjct 298313 CTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAGATATCA 298254 Query 106895 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATT 106950 || |||||||| || || || | || | | || |||| | ||| | || | Sbjct 298253 GCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTG-TTACCACCCTGGTC 298195 Query 106951 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 107010 ||||| || || || ||||| || |||| ||| ||||| | || | || ||| Sbjct 298194 GACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAAGTACC 298135 Query 107011 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 107070 ||||| || ||| ||| | | | | | | |||||| || | |||||||| Sbjct 298134 GTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACC 298075 Query 107071 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 107130 ||||| || || || ||||| || | | ||| | || ||||| | ||| || Sbjct 298074 ACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGA 298015 Query 107131 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 107190 ||||||||| |||||| | ||| ||| |||||| || ||| |||| ||||||||||| Sbjct 298014 GTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATT 297955 Query 107191 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTCTCCA 107249 || | ||||| | || ||| | || || || | ||||| || ||||| || | Sbjct 297954 AAACAAAGTTGGAGAGGCATGAGT-AAAGTATTTTAGAGACATTAAGTTATATGTTTCTA 297896 Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309 ||| || |||||| ||||||||||| | || || | ||||| | || ||| | Sbjct 297895 GAGCAGCTTCGATGTCTCTACCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTGTG 297836 Query 107310 G 107310 | Sbjct 297835 G 297835 >seq9 Length=431692 Score = 242 bits (268), Expect = 4e-59 Identities = 899/1382 (65%), Gaps = 50/1382 (4%) Strand=Plus/Plus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGTTGGCATTGGTGC 106011 |||||||| ||||| |||| |||||||| |||| | || ||||| ||||||||||| || Sbjct 226245 GGTTCAAAACATTCGTTAT-ACCCAAGAATTTGAGAAGTCGAGGCAGTTGGCATTGGCGC 226303 Query 106012 CATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCA 106068 ||| ||||| ||| | | || | || ||| | || ||| ||| ||||| Sbjct 226304 CATTGTTAAAGA--GTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAAGATT-TCCCA 226360 Query 106069 GTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGAC 106126 || | | | | ||| || | |||| |||| |||||||| || | || | || Sbjct 226361 ATCCCACAT-ACCAAATGGCTTAGCGTTCC-ACATGTCAAATTGTAGAATACCCTTAGAG 226418 Query 106127 GTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAG--CCAATTCACAGCTCG 106184 | |||||||| || || || ||| ||||| |||| | ||||||||||| | Sbjct 226419 GCTGGAGAACCTTCGAAAGTGGAATACTTACCTTC--CTTCTGTGCCAATTCACAGGAGG 226476 Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244 | || || | || ||||| |||||||| || || | |||| | ||||| | Sbjct 226477 CTTCAAGAGTAGCATGATAGATGGTTTCGAAAATCTGTTTGTTCAAAGTTTGAGCTTCTT 226536 Query 106245 CTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303 | || ||||| | |||| ||| || ||| | ||| || ||||||||||||||||| Sbjct 226537 CCGATTCAAAGG-GTAGACGCAACATCATATAGGTATCGGCCAGACCTTGAACACCCAAG 226595 Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTG 106363 |||||||||| || |||||| || |||| || ||| |||||| |||| | Sbjct 226596 GCAATAGGTCTATGCTTCATATTTGAATTTCTGGCTTCAGGAACTGGATAATAATTACGA 226655 Query 106364 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAA 106423 || ||||||| ||| | || | ||||| | || | |||||||| | | || || Sbjct 226656 TCGATGACTCTGTTCAAGTTATGGGTAATTACTTTAGCAATTTCATGTAAACTCTCGAAA 226715 Query 106424 TCAAAAGTGCGAGTCT------CTTCA------TTGACATACTTTGGAAGGGCGATTGAT 106471 | | || | ||| | ||||| | |||| | ||| ||||| || || Sbjct 226716 TTATAACTTGCAGTTTTACCATCTTCAGACATCTCGACAAATGCTGGGAGGGCAATAGAG 226775 Query 106472 GCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAG 106531 || | ||| ||||| || || ||||| | ||||| | ||||| |||||| Sbjct 226776 GCTAGATTACAAACGGCGGTTTCATCTGGGGAGGAATACTCGACGATTTCACAACACAAA 226835 Query 106532 TTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTG 106591 ||||| ||||| || ||||| |||| |||||| ||||| | || || | |||||| Sbjct 226836 TTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTATTACATGAGTCCTTG 226895 Query 106592 TAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG-AGAATTGCCTTCCACA-CAT 106649 || | |||| | || || || || || || |||| |||| | |||||| | ||| | | | Sbjct 226896 TAAACCATGAAAGGTGTACCTGTTTCTGTTTGTG-CTTGTAAAATTGCATACCATAACTT 226954 Query 106650 CGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTT 106709 | | || ||||| || | || || ||| ||||| || || || ||| Sbjct 226955 TTGGGCCTT----AATGGTTTTACCACGACCTTCCCTTTCGTAACGGGTATATAGCTCTT 227010 Query 106710 CAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACC 106769 |||| || |||||| | || | |||||| || ||| | || | || || Sbjct 227011 CAAATTCATCACCCCAGACATCATCTAAACCTGGGGCAGCACTGGGAGAAAATAAAGTCC 227070 Query 106770 ATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 106829 | | ||| |||| | ||| || ||||| |||||||| ||||||||||| | | || | Sbjct 227071 AGGGCCCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGCAGGGAACA 227130 Query 106830 GATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATG 106888 ||| || ||| || ||||| | ||| ||| | || | || | || || | | Sbjct 227131 AATCCCTTGCACGGATT-TCTTCTTTACCATGGGTTTTTCTAATATCGACAAAGTCGAAG 227189 Query 106889 ATATCCGCGTGCCATGGCTC-AAGATAG-----ACTGCGATAGATCCCTTTCGACGCCCA 106942 ||||| || |||||||| || |||| | | ||| || || ||| || || Sbjct 227190 ATATCTGCATGCCATGGTTCCAAGAAAAGGGCAAAGGCGCCAGGTCTCTTGTTACCTCC- 227248 Query 106943 GCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCT 107002 ||| | ||||| || || || ||| || || || | ||| ||||| | |||| | Sbjct 227249 --TTGGTCCACATAACGAGCAGTATTGTTGAAAACACGGATCATAGGAATCAACCCATTT 227306 Query 107003 GATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATC 107062 || ||| || || || ||| ||| ||| | | | | || || | Sbjct 227307 GAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATGAAGA 227366 Query 107063 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 107122 |||| ||| || || ||| || || ||||| || | | ||| |||| ||||| Sbjct 227367 CCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCT 227426 Query 107123 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 107182 | || ||||| ||||| |||| || ||||| || ||||| || || ||| ||| Sbjct 227427 TCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGTGGAGTA 227486 Query 107183 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTGTCGTA 107241 ||||| ||||| | |||||| | |||||| |||| ||| ||| |||||| | ||| Sbjct 227487 CCAGCGTTGAATAAGGTTGGGGAAGCGTGAGTGAA-ATATCTTAACGACATCAAATTGTA 227545 Query 107242 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 |||| || ||||| ||||| || |||||||| || | ||||||||||||| || Sbjct 227546 GGTCTTCAGCACAGACTCAATATCACTACCGTGGATACCCAGCGCCACACGCATAACCAA 227605 Query 107302 GT 107303 || Sbjct 227606 GT 227607 >seq10 Length=707288 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||| || |||| | |||| | ||| || |||||| | ||| Sbjct 371362 GCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTCAAACCT 371303 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||| | ||| | |||||||||||| |||| | | ||| || ||||||||||||| | Sbjct 371302 GGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGACA 371243 Query 117394 CCCTCCACACACGCAAACGC 117413 || || | | | ||||| || Sbjct 371242 CCTTCGATAGAAGCAAAGGC 371223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980674629080