Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq13 107 2e-18
>seq13
Length=935281
Score = 107 bits (118), Expect = 2e-18
Identities = 315/483 (65%), Gaps = 2/483 (0%)
Strand=Plus/Plus
Query 154602 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 154661
|| ||||| || ||| ||| || ||||||||||| |||| |||| ||||| || |
Sbjct 626870 ATTACAGGTTTCGATGGTATTTCTTTACAACCTAATTCAGGTGCACAAGGTGAATACACC 626929
Query 154662 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 154721
|| || || |||| | | ||| || | || || | | | || ||||||
Sbjct 626930 GGTTTGAGAGTAATCAGATCTTACTTGGAAAGCAAGGGTGAAAGTTACCGTAACGTATGT 626989
Query 154722 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAA 154781
|| || || | || || ||||| || ||||| ||| ||||| |||||| || |||||
Sbjct 626990 TTAATCCCCGTTTCCGCTCATGGCACAAATCCAGCTTCTGCTGCCATGGCGGGTTTGAAA 627049
Query 154782 GTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAA 154841
||||| |||||| ||| | |||||| | || | || || ||| ||
Sbjct 627050 GTTGTTCCTGTCAACTGTTTACAAGATGGTTCTTTGGATCTGGCTGACTTAAAGACCAAG 627109
Query 154842 GCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATCTACACATGGT 154901
|| | | || | ||||| | | ||||| || || || ||||| |||||
Sbjct 627110 GCTGAAAAGCATTCTAAAGAACTAGCTGCCGTAATGATCACTTATCCTTCTACTTATGGT 627169
Query 154902 GTATTTGAAACTAACATTAGACA-GATATGTAAGATCGTTCATGACAATGGTGGTCAGGT 154960
|||||||| | ||| ||| | ||| | ||||| ||| |||||| || ||
Sbjct 627170 TTATTTGAACCAGGCATCCAACATGCTATCGAT-ATCGTGCATTCTTTTGGTGGGCAAGT 627228
Query 154961 ATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGG 155020
|||| | ||||| || ||| | || || ||||| || || | |||| | || |||
Sbjct 627229 ATATTTGGATGGTGCTAATATGAACGCGCAGGTTGGGTTAACTTCACCAGGAGATCTTGG 627288
Query 155021 TGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGG 155080
||||||||| || || | || || || || ||||| | || || ||||| ||||| ||
Sbjct 627289 TGCAGATGTCTGCCACTTGAATTTGCACAAGACATTTTCCATCCCTCATGGTGGTGGTGG 627348
Query 155081 TCC 155083
|||
Sbjct 627349 TCC 627351
Score = 93.3 bits (102), Expect = 5e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827
||| | |||||| | || ||||| ||||| |||||||||||||| || ||||| |
Sbjct 626006 CAACGATTTGGTGTCCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTTGCTGTCATT 626065
Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887
|| |||| || ||||| || || ||||||||||| ||| ||| ||| | |||
Sbjct 626066 GATAAGTTAAATAGAAAAATTCCAGGCAGAATTGTCGGTGTGTCTAAAGACCGCTTAGGG 626125
Query 153888 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCA 153947
|| | || | | || || || || || |||||||| || || | | | || || |||
Sbjct 626126 AAAACGGCCTTGCGTTTGGCCCTCCAAACCAGAGAGCAACACATAAAGCGTGATAAGGCA 626185
Query 153948 ACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986
|| || || || || ||||| || || ||||||||
Sbjct 626186 ACTTCAAATATTTGTACCGCTCAAGCTCTATTGGCTAAT 626224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212676917280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |