Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 >seq13 Length=935281 Score = 107 bits (118), Expect = 2e-18 Identities = 315/483 (65%), Gaps = 2/483 (0%) Strand=Plus/Plus Query 154602 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 154661 || ||||| || ||| ||| || ||||||||||| |||| |||| ||||| || | Sbjct 626870 ATTACAGGTTTCGATGGTATTTCTTTACAACCTAATTCAGGTGCACAAGGTGAATACACC 626929 Query 154662 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 154721 || || || |||| | | ||| || | || || | | | || |||||| Sbjct 626930 GGTTTGAGAGTAATCAGATCTTACTTGGAAAGCAAGGGTGAAAGTTACCGTAACGTATGT 626989 Query 154722 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAA 154781 || || || | || || ||||| || ||||| ||| ||||| |||||| || ||||| Sbjct 626990 TTAATCCCCGTTTCCGCTCATGGCACAAATCCAGCTTCTGCTGCCATGGCGGGTTTGAAA 627049 Query 154782 GTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAA 154841 ||||| |||||| ||| | |||||| | || | || || ||| || Sbjct 627050 GTTGTTCCTGTCAACTGTTTACAAGATGGTTCTTTGGATCTGGCTGACTTAAAGACCAAG 627109 Query 154842 GCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATCTACACATGGT 154901 || | | || | ||||| | | ||||| || || || ||||| ||||| Sbjct 627110 GCTGAAAAGCATTCTAAAGAACTAGCTGCCGTAATGATCACTTATCCTTCTACTTATGGT 627169 Query 154902 GTATTTGAAACTAACATTAGACA-GATATGTAAGATCGTTCATGACAATGGTGGTCAGGT 154960 |||||||| | ||| ||| | ||| | ||||| ||| |||||| || || Sbjct 627170 TTATTTGAACCAGGCATCCAACATGCTATCGAT-ATCGTGCATTCTTTTGGTGGGCAAGT 627228 Query 154961 ATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGG 155020 |||| | ||||| || ||| | || || ||||| || || | |||| | || ||| Sbjct 627229 ATATTTGGATGGTGCTAATATGAACGCGCAGGTTGGGTTAACTTCACCAGGAGATCTTGG 627288 Query 155021 TGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGG 155080 ||||||||| || || | || || || || ||||| | || || ||||| ||||| || Sbjct 627289 TGCAGATGTCTGCCACTTGAATTTGCACAAGACATTTTCCATCCCTCATGGTGGTGGTGG 627348 Query 155081 TCC 155083 ||| Sbjct 627349 TCC 627351 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827 ||| | |||||| | || ||||| ||||| |||||||||||||| || ||||| | Sbjct 626006 CAACGATTTGGTGTCCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTTGCTGTCATT 626065 Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887 || |||| || ||||| || || ||||||||||| ||| ||| ||| | ||| Sbjct 626066 GATAAGTTAAATAGAAAAATTCCAGGCAGAATTGTCGGTGTGTCTAAAGACCGCTTAGGG 626125 Query 153888 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCA 153947 || | || | | || || || || || |||||||| || || | | | || || ||| Sbjct 626126 AAAACGGCCTTGCGTTTGGCCCTCCAAACCAGAGAGCAACACATAAAGCGTGATAAGGCA 626185 Query 153948 ACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 || || || || || ||||| || || |||||||| Sbjct 626186 ACTTCAAATATTTGTACCGCTCAAGCTCTATTGGCTAAT 626224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212676917280