Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq13 111 2e-19 >seq13 Length=935281 Score = 111 bits (122), Expect = 2e-19 Identities = 316/483 (65%), Gaps = 2/483 (0%) Strand=Plus/Plus Query 159277 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 159336 || ||||| || ||| ||| || ||||||||||| |||| |||| ||||| || | Sbjct 626870 ATTACAGGTTTCGATGGTATTTCTTTACAACCTAATTCAGGTGCACAAGGTGAATACACC 626929 Query 159337 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 159396 || || || |||| | | ||| || | || || | | | || |||||| Sbjct 626930 GGTTTGAGAGTAATCAGATCTTACTTGGAAAGCAAGGGTGAAAGTTACCGTAACGTATGT 626989 Query 159397 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAA 159456 || || || | || || ||||| || ||||| || || || | ||||| || ||||| Sbjct 626990 TTAATCCCCGTTTCCGCTCATGGCACAAATCCAGCTTCTGCTGCCATGGCGGGTTTGAAA 627049 Query 159457 GTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAA 159516 ||||| |||||| ||| | ||||| | || | || || ||| || Sbjct 627050 GTTGTTCCTGTCAACTGTTTACAAGATGGTTCTTTGGATCTGGCTGACTTAAAGACCAAG 627109 Query 159517 GCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGT 159576 || | | || | ||||| | | ||||| || ||||| ||||| ||||| Sbjct 627110 GCTGAAAAGCATTCTAAAGAACTAGCTGCCGTAATGATCACTTATCCTTCTACTTATGGT 627169 Query 159577 GTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGAGAATGGTGGTCAGGT 159635 |||||||| || |||| ||| | ||| | || || ||| |||||| || || Sbjct 627170 TTATTTGAACCAGGCATCCAACATGCTATCGAT-ATCGTGCATTCTTTTGGTGGGCAAGT 627228 Query 159636 ATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGG 159695 |||| | |||||||| ||| | || || ||||| || || | |||| | || ||| Sbjct 627229 ATATTTGGATGGTGCTAATATGAACGCGCAGGTTGGGTTAACTTCACCAGGAGATCTTGG 627288 Query 159696 TGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGG 159755 ||||||||| || || | || || || |||||||| | || || ||||| ||||| || Sbjct 627289 TGCAGATGTCTGCCACTTGAATTTGCACAAGACATTTTCCATCCCTCATGGTGGTGGTGG 627348 Query 159756 TCC 159758 ||| Sbjct 627349 TCC 627351 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||| | |||||| | || ||||| || || |||||||||||||| || ||||| | Sbjct 626006 CAACGATTTGGTGTCCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTTGCTGTCATT 626065 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || |||| || ||||| || || ||||||||||| ||| ||| ||| || ||| Sbjct 626066 GATAAGTTAAATAGAAAAATTCCAGGCAGAATTGTCGGTGTGTCTAAAGACCGCTTAGGG 626125 Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622 || | || | | || || || || || |||||||| || || | | || || ||| Sbjct 626126 AAAACGGCCTTGCGTTTGGCCCTCCAAACCAGAGAGCAACACATAAAGCGTGATAAGGCA 626185 Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 || || || || || || ||||| || |||||||| Sbjct 626186 ACTTCAAATATTTGTACCGCTCAAGCTCTATTGGCTAAT 626224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051075039120