Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq10 219 5e-52
seq9 199 4e-46
seq5 179 4e-40
>seq10
Length=707288
Score = 219 bits (242), Expect = 5e-52
Identities = 600/912 (66%), Gaps = 9/912 (1%)
Strand=Plus/Minus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
||||| || || | |||||| ||||||||||| || || || || | || || || |
Sbjct 371656 TTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCCAAAGAGATGTTT 371597
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||| || || || |||| || || || ||| ||| || || | | |
Sbjct 371596 TCCATAAAGTCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTACCGAAGGCAACCAAA 371537
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
||||| || || || || | || ||| |||||| | ||| ||||| |||| ||
Sbjct 371536 AGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTCAGCGTTCATACCTAGCAAG 371477
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAAT-TCTT-GTTCTATATTTACTGCCTCTGATATAA 18907
||| |||| || || ||||| | |||| |||| || | || ||||| | | ||
Sbjct 371476 GCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAA 371419
Query 18908 TAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAA 18967
| | |||| | || | || || | ||| |||| || |||||||
Sbjct 371418 TTTTTTCAACAATTGCTGGGTCTGGTTTGTTCTTCAAATGGGCGAACAATAAGCATGCAA 371359
Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027
| || || | || |||||||| | |||||||| ||||| || || ||||| ||||
Sbjct 371358 AGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTCAAACCTGGCA 371299
Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087
||| ||||| || || |||||||| || || || || || || || ||||| | |||||
Sbjct 371298 TCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGACACCTT 371239
Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGAATCCAT 19146
| | | ||||| || ||||||||||| ||| ||| | || ||| | |||||||||
Sbjct 371238 CGATAGAAGCAAAGGCGACTAGTCTTTCACCA-AACAAGGCGTCAGCGTCTTGAATCCAT 371180
Query 19147 TTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGA 19206
| || ||||| || ||||||| | ||| || || | || | ||| || |
Sbjct 371179 CTTAGAGCCCACTCGGCCTTCTCACCGATTTCTGGGATAGTGTGAATGGCATTGAACAAG 371120
Query 19207 TACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAA 19266
| || || | | || || | || | ||| |||||||| ||| |||| |||
Sbjct 371119 AATTCACTTTCCTTAGGGTCCTTGATGTAGGTATCGATCAATAAGGAGTAAGTTTCAGAA 371060
Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326
||||||||||| || || || || || || |||| |||| |||| || || |||
Sbjct 371059 TGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTTTGCCTCTGGAATTTGAACT 371000
Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386
|| | | || |||| ||||| ||||||||||| || || ||| ||| || |||||
Sbjct 370999 TCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAG 370940
Query 19387 GCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAATCATTA 19443
|| | || ||||||| | | || | | | | | | | ||||| |||| |
Sbjct 370939 GCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGTTCATTCTGTTGTTCCAGTCATGA 370880
Query 19444 ATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATAC 19503
||||| ||||| ||||| | ||||||| | ||||| ||||| || || || |||||
Sbjct 370879 ATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAGGCTTCGGCACGCTTATAA 370820
Query 19504 ATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTA 19563
| ||| || ||| | || | ||||| || | |||| ||| | || | || ||
Sbjct 370819 GCTTGCCAAATTTCATGGTACTTGATAGGGAAAAGAACAGTTCTTTCCTTGTCCTCATTC 370760
Query 19564 AGAATAGGTTCC 19575
| | |||||||
Sbjct 370759 AACAAAGGTTCC 370748
>seq9
Length=431692
Score = 199 bits (220), Expect = 4e-46
Identities = 529/809 (65%), Gaps = 3/809 (0%)
Strand=Plus/Plus
Query 47877 AGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATT 47936
|| || ||||| ||||||||||| || || |||| ||| | ||| | | |||
Sbjct 226764 AGGGCAATAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAGGAATACTCGACGATT 226823
Query 47937 TCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTA 47996
||| ||| | ||| |||| || |||||||| || || || || | | |||
Sbjct 226824 TCACAACACAAATTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTATTA 226883
Query 47997 CATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGAT 48056
|||| ||||||||||| ||| |||||||| || |||||| | || | || | || |
Sbjct 226884 CATGAGTCCTTGTAAACCATGAAAGGTGTACCTGTTTCTGTTTGTGCTTGTAAAATTGCA 226943
Query 48057 TTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTA 48116
| ||| | | ||||| || | | || | | || |||||| |||
Sbjct 226944 TACCATAACTTTTGGGCCTTAATG---GTTTTACCACGACCTTCCCTTTCGTAACGGGTA 227000
Query 48117 TATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACAC 48176
|||| || ||||||||||| || | |||| |||||| || || || | ||| |
Sbjct 227001 TATAGCTCTTCAAATTCATCACCCCAGACATCATCTAAACCTGGGGCAGCACTGGGAGAA 227060
Query 48177 ATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGA 48236
| || | ||| | |||| | || || | ||||||| | || || ||||| |||
Sbjct 227061 AATAAAGTCCAGGGCCCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGA 227120
Query 48237 GCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGA 48296
|| || |||||||| | | | |||||| || ||| | || ||| || | |
Sbjct 227121 GCAGGGAACAAATCCCTTGCACGGATTTCTTCTTTACCATGGGTTTTTCTAATATCGACA 227180
Query 48297 AAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTA 48356
||||| | ||||| |||||||||||||| || | | || | | || |||| ||
Sbjct 227181 AAGTCGAAGATATCTGCATGCCATGGTTCCAAGAAAAGGGCAAAGGCGCCAGGTCTCTTG 227240
Query 48357 TTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATA 48416
||||||||||| || | ||| | ||||||||||| |||| | | ||| || | |
Sbjct 227241 TTACCTCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGGATCATAGGAATCAAC 227300
Query 48417 CCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATT 48476
|||||||| |||| ||||| || | |||||| || | | | || || ||||
Sbjct 227301 CCATTTGAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATA 227360
Query 48477 GAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAA 48536
|| ||| | ||||||||| | || || || | |||||| ||| | |||||||||
Sbjct 227361 TGAAGACCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAA 227420
Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596
|| ||||| ||| ||||| |||| | ||| ||||| ||||||||| |||||
Sbjct 227421 ATACCTTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGT 227480
Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656
||| || | || ||||| ||||| || || ||| | || || | || | |||
Sbjct 227481 GGAGTACCAGCGTTGAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTAACGACATCAAA 227540
Query 48657 TTATATGTTTCAATAACAGAATCTATATC 48685
|| || || | | ||||| || |||||
Sbjct 227541 TTGTAGGTCTTCAGCACAGACTCAATATC 227569
>seq5
Length=571131
Score = 179 bits (198), Expect = 4e-40
Identities = 570/874 (65%), Gaps = 31/874 (4%)
Strand=Plus/Minus
Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270
|||| || | ||| || ||||| ||||| ||| ||||| || | | | |||||| |
Sbjct 298354 TCATGAAAAGATCAGGAATCCACAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTT 298295
Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330
| || ||| || | | |||| ||| || | |||||||||||||||||||| | |
Sbjct 298294 TACCGTGGTTCTTTCTGATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGT 298235
Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390
| | || | |||| |||| ||| ||||| || || || | ||| | ||| ||||| |
Sbjct 298234 ACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCCTGGTCGACATAACGGGCGGTATTAT 298175
Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450
|| |||| | | ||| || | | || || || |||| || || || | ||| |||
Sbjct 298174 TAAAAACACGAATCATGGGAATTAACCCGTTAGAAGTACCGTTTGTACCAGCAATGTAAG 298115
Query 48451 TTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTA 48510
||| | | | || ||| || | ||| |||||||| || |||| || || |
Sbjct 298114 AACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCA 298055
Query 48511 GAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATA 48570
|||||| ||| | || || ||||| || || ||| || || |||| | |
Sbjct 298054 AAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCA 297995
Query 48571 GAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCAT 48630
|||||| |||||||| || | ||| || | |||||| || |||||||| ||||
Sbjct 297994 AGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGTTGGAGAGGCAT 297935
Query 48631 GAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATT 48690
|| |||| |||| || | || ||||||||||| | | ||| || || || |
Sbjct 297934 GAGTAAAGTATTTTAGAGACATTAAGTTATATGTTTCTAGAGCAGCTTCGATGTCTCTAC 297875
Query 48691 GATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTAT 48750
|| || || | | || | ||| | | | ||| || | ||| | | || | |
Sbjct 297874 CGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTGTGGACGTTCGGCCACTTGGCCGT 297815
Query 48751 TTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA-TGAAAAG 48809
| ||| | | | ||| || |||||| ||||| ||||||||||| |||| || |||
Sbjct 297814 TGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTGAAACCAAAATAACTGTACTGGAAA- 297756
Query 48810 TCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTT-TAT----ATACT---- 48860
|| | |||| | ||||| || |||| | | ||||| | || || |||||
Sbjct 297755 TCTCTGTCATAGACAATTGCAGAGTTTAATTTATCCTTGTTTTCCATGACAATACTGTAG 297696
Query 48861 ACATC--CATTA--CAT----------TTTTTGATATAA---TTGA-TTCCTTGTAAAGA 48902
||||| || | ||| || || | |||| | | ||||||
Sbjct 297695 ACATCGTCAGAAATCATGGGAGCGGGCTTACCAGTAGCAGCGTTGACATATCTATAAAGA 297636
Query 48903 TCTTCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATT 48962
||||| ||||| | | |||| |||| | |||| |||||| | |||||| || | |||
Sbjct 297635 TCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAATTAGAAATGGCAATT 297576
Query 48963 CTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTAC-TAGATATTTCTGC 49021
|| ||||| || |||| ||||||||||||| || || ||||||| | || | |||||
Sbjct 297575 CTGGCAGCCAAGGTAGCGTAATCTGGATGAACAGTGGT-CATGTACGCACATGTCTCTGC 297517
Query 49022 TGCTAATATATCTAATTCTTTAGTAGTTACACCT 49055
||||| | |||| |||| | || || ||||||
Sbjct 297516 GGCTAAGTTGTCTAGTTCTATTGTCGTGACACCT 297483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108680551880
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