Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq10 163 3e-35 >seq10 Length=707288 Score = 163 bits (180), Expect = 3e-35 Identities = 385/575 (67%), Gaps = 11/575 (2%) Strand=Plus/Minus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 |||||||| |||||||| || || |||||||| ||||| | |||||||| ||||| Sbjct 371374 AACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAG 371315 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 ||||| || |||||||| | |||||| || || | ||| || || | || || || || Sbjct 371314 AAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCG 371255 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 || ||||| | |||||| | | ||||| || || || | | ||| || | | Sbjct 371254 GAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCA 371195 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCA---ATTGTT 37403 || ||||||| || | ||| || ||||| | | | ||| || || Sbjct 371194 GCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTC---TCACCGATTTCTGGGATAGTG 371138 Query 37404 TCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGT 37463 | ||| || || || | || | |||| | | || | || || ||||| || | | Sbjct 371137 TGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGATGTAGGTATCGATCAAT 371078 Query 37464 AAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTA 37523 || || ||||||| |||||||||||||| || || |||||||| |||| | | Sbjct 371077 AAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTTT 371018 Query 37524 GCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCA 37583 || || | | |||||| ||| | | || | | | | |||||||||||||| || || Sbjct 371017 GCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCG 370958 Query 37584 TCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATA 37641 ||| ||| || || || |||||||| |||||| ||| || | | || || Sbjct 370957 TCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGTTCATT 370898 Query 37642 AT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTT 37700 | || ||||| |||| |||||| || || ||||||| ||| ||| ||||||| ||| Sbjct 370897 CTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAG 370838 Query 37701 GCCAATGCACGTTTATACATCGT-CCAAATATCAT 37734 || ||||| ||||| | | | |||||| |||| Sbjct 370837 GCTTCGGCACGCTTATA-AGCTTGCCAAATTTCAT 370804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316674132680