Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq5 145 4e-30
seq9 105 3e-18
>seq5
Length=571131
Score = 145 bits (160), Expect = 4e-30
Identities = 316/473 (67%), Gaps = 0/473 (0%)
Strand=Plus/Minus
Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949
||||| |||| ||| |||| |||| | || || || ||| || | ||| ||||
Sbjct 298396 TTGGAGAGAACAAAGTCCAAGTCCCATTCTCTTCGACACGCTTCATGAAAAGATCAGGAA 298337
Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009
|||||| ||| ||| |||||||| || | ||||||||||| ||||| |||||| | |
Sbjct 298336 TCCACAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGA 298277
Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069
||| | |||||||| ||||| | ||||||||||| | || | |||||| |||
Sbjct 298276 TATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAG 298217
Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
|||||| ||||| || || || || | || || | ||| ||||| | ||| |
Sbjct 298216 GTCTTTTGTTACCACCCTGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGG 298157
Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189
||| ||| || | ||| |||||||| | | ||| | || || || || | ||| |
Sbjct 298156 GAATTAACCCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGT 298097
Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249
|| ||| | ||| || |||||||| ||| ||||| ||||| ||| | |
Sbjct 298096 TATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAG 298037
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
| ||| |||| || | || || | ||||| | | || |||||||| || | ||
Sbjct 298036 TGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTT 297977
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
| | | | || || | |||||| || || || | ||||||||| | |||
Sbjct 297976 GAGGTTTTGGAGTACCAGCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTAT 297924
>seq9
Length=431692
Score = 105 bits (116), Expect = 3e-18
Identities = 282/431 (65%), Gaps = 0/431 (0%)
Strand=Plus/Plus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||| | || |||||||||| ||| || ||||| || || | |||||||||||
Sbjct 227096 CATAAAAAGGTCAGGAATCCACAGAGCAGGGAACAAATCCCTTGCACGGATTTCTTCTTT 227155
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
|| || | ||| | | ||| | || || || ||||||| ||||||||||| || |
Sbjct 227156 ACCATGGGTTTTTCTAATATCGACAAAGTCGAAGATATCTGCATGCCATGGTTCCAAGAA 227215
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
| ||||| || ||| || || ||||| || || || | ||||| | ||
Sbjct 227216 AAGGGCAAAGGCGCCAGGTCTCTTGTTACCTCCTTGGTCCACATAACGAGCAGTATTGTT 227275
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172
|||||| | ||| |||| || ||| ||||| ||||| || | || | ||
Sbjct 227276 GAAAACACGGATCATAGGAATCAACCCATTTGAAGTACCGTTGGTACCGGCGATATAAGA 227335
Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232
||||| || | || | || | ||||| ||| | ||||| || || |||||
Sbjct 227336 ACCTGTGGAACGGATGTTGTTAATATGAAGACCAACACCACCTGCAGTCTTGGAAATCAT 227395
Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292
||||| ||| | ||||| |||| |||| || ||| | ||||| | | ||
Sbjct 227396 AGCACATTCTTTCAAAGTATCATAAATACCTTCAATAGAGTCATCCTTCATGGCAATTAG 227455
Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352
||||| ||||| | ||| | ||| | || || | || ||||| || || | ||| ||
Sbjct 227456 GAAACATGAAGACATTTGGGGATGTGGAGTACCAGCGTTGAATAAGGTTGGGGAAGCGTG 227515
Query 26353 AGTATAATATC 26363
||| ||||||
Sbjct 227516 AGTGAAATATC 227526
Score = 98.7 bits (108), Expect = 5e-16
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107
||||||||| | ||||||||||||||| |||| || | ||||||||||| || || ||
Sbjct 226232 GTTTGAAGTCACTGGTTCAAAACATTCGTTATACCCAAGAATTTGAGAAGTCGAGGCAGT 226291
Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167
||||||| || ||| || || ||||| || |||| ||| ||||| || | | ||||
Sbjct 226292 TGGCATTGGCGCCATTGTTAAAGAGTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAA 226351
Query 25168 TTTATCCCAATC 25179
| ||||||||
Sbjct 226352 GATTTCCCAATC 226363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039947573275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |