Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 145 4e-30 seq9 105 3e-18 >seq5 Length=571131 Score = 145 bits (160), Expect = 4e-30 Identities = 316/473 (67%), Gaps = 0/473 (0%) Strand=Plus/Minus Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949 ||||| |||| ||| |||| |||| | || || || ||| || | ||| |||| Sbjct 298396 TTGGAGAGAACAAAGTCCAAGTCCCATTCTCTTCGACACGCTTCATGAAAAGATCAGGAA 298337 Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009 |||||| ||| ||| |||||||| || | ||||||||||| ||||| |||||| | | Sbjct 298336 TCCACAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGA 298277 Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069 ||| | |||||||| ||||| | ||||||||||| | || | |||||| ||| Sbjct 298276 TATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAG 298217 Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129 |||||| ||||| || || || || | || || | ||| ||||| | ||| | Sbjct 298216 GTCTTTTGTTACCACCCTGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGG 298157 Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189 ||| ||| || | ||| |||||||| | | ||| | || || || || | ||| | Sbjct 298156 GAATTAACCCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGT 298097 Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249 || ||| | ||| || |||||||| ||| ||||| ||||| ||| | | Sbjct 298096 TATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAG 298037 Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309 | ||| |||| || | || || | ||||| | | || |||||||| || | || Sbjct 298036 TGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTT 297977 Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362 | | | | || || | |||||| || || || | ||||||||| | ||| Sbjct 297976 GAGGTTTTGGAGTACCAGCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTAT 297924 >seq9 Length=431692 Score = 105 bits (116), Expect = 3e-18 Identities = 282/431 (65%), Gaps = 0/431 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | || |||||||||| ||| || ||||| || || | ||||||||||| Sbjct 227096 CATAAAAAGGTCAGGAATCCACAGAGCAGGGAACAAATCCCTTGCACGGATTTCTTCTTT 227155 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || | ||| | | ||| | || || || ||||||| ||||||||||| || | Sbjct 227156 ACCATGGGTTTTTCTAATATCGACAAAGTCGAAGATATCTGCATGCCATGGTTCCAAGAA 227215 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 | ||||| || ||| || || ||||| || || || | ||||| | || Sbjct 227216 AAGGGCAAAGGCGCCAGGTCTCTTGTTACCTCCTTGGTCCACATAACGAGCAGTATTGTT 227275 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 |||||| | ||| |||| || ||| ||||| ||||| || | || | || Sbjct 227276 GAAAACACGGATCATAGGAATCAACCCATTTGAAGTACCGTTGGTACCGGCGATATAAGA 227335 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 ||||| || | || | || | ||||| ||| | ||||| || || ||||| Sbjct 227336 ACCTGTGGAACGGATGTTGTTAATATGAAGACCAACACCACCTGCAGTCTTGGAAATCAT 227395 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 ||||| ||| | ||||| |||| |||| || ||| | ||||| | | || Sbjct 227396 AGCACATTCTTTCAAAGTATCATAAATACCTTCAATAGAGTCATCCTTCATGGCAATTAG 227455 Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352 ||||| ||||| | ||| | ||| | || || | || ||||| || || | ||| || Sbjct 227456 GAAACATGAAGACATTTGGGGATGTGGAGTACCAGCGTTGAATAAGGTTGGGGAAGCGTG 227515 Query 26353 AGTATAATATC 26363 ||| |||||| Sbjct 227516 AGTGAAATATC 227526 Score = 98.7 bits (108), Expect = 5e-16 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107 ||||||||| | ||||||||||||||| |||| || | ||||||||||| || || || Sbjct 226232 GTTTGAAGTCACTGGTTCAAAACATTCGTTATACCCAAGAATTTGAGAAGTCGAGGCAGT 226291 Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167 ||||||| || ||| || || ||||| || |||| ||| ||||| || | | |||| Sbjct 226292 TGGCATTGGCGCCATTGTTAAAGAGTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAA 226351 Query 25168 TTTATCCCAATC 25179 | |||||||| Sbjct 226352 GATTTCCCAATC 226363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039947573275