Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq13 123 3e-23 >seq13 Length=935281 Score = 123 bits (136), Expect = 3e-23 Identities = 321/485 (66%), Gaps = 6/485 (1%) Strand=Plus/Minus Query 138204 GGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCT 138263 ||||| ||||| ||||| || || | |||||||| || ||||| | || || |||||| Sbjct 627351 GGACCACCACCACCATGAGGGATGGAAAATGTCTTGTGCAAATTCAAGTGGCAGACATCT 627292 Query 138264 GCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGA 138323 |||||| || | |||| | || || ||||| || || | ||| |||||||| | | Sbjct 627291 GCACCAAGATCTCCTGGTGAAGTTAACCCAACCTGCGCGTTCATATTAGCACCATCCAAA 627232 Query 138324 TATACCTGACCACCATTGTCATGAACGATCTTACATATC-TGTCTGATGTTTGTTTCAAA 138382 ||||| || |||||| ||| ||||| | ||| | ||| |||| || |||||| Sbjct 627231 TATACTTGCCCACCAAAAGAATGCACGAT-ATCGATAGCATGTTGGATGCCTGGTTCAAA 627173 Query 138383 TACACCATGAGTCGATGGATATGTAATCATAATACATGAG--AGTTCAAATGTATTCATG 138440 || ||||| ||| || ||||| || ||||| ||| || ||||| | || | | Sbjct 627172 TAAACCATAAGTAGAAGGATAAGTGATCAT--TACGGCAGCTAGTTCTTTAGAATGCTTT 627115 Query 138441 ATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATCATCATCACACTTGACACCT 138500 || || ||| || || | || | ||||| | ||| |||||| Sbjct 627114 TCAGCCTTGGTCTTTAAGTCAGCCAGATCCAAAGAACCATCTTGTAAACAGTTGACAGGA 627055 Query 138501 ACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGT 138560 |||||||||| || |||||| | ||| ||| ||||| || ||||| || || | || Sbjct 627054 ACAACTTTCAAACCCGCCATGGCAGCAGAAGCTGGATTTGTGCCATGAGCGGAAACGGGG 626995 Query 138561 ATCAGACATACATTTCTTTTATCATCTCCTGATCCTTGATGATATGCTTGGATTGCTAAC 138620 || | |||||| || | | | || || | || || | | |||| || | Sbjct 626994 ATTAAACATACGTTACGGTAACTTTCACCCTTGCTTTCCAAGTAAGATCTGATTACTCTC 626935 Query 138621 AGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCT 138680 | || | || ||||| |||| |||| ||||||||||| || ||| ||| |||||| Sbjct 626934 AAACCGGTGTATTCACCTTGTGCACCTGAATTAGGTTGTAAAGAAATACCATCGAAACCT 626875 Query 138681 GTGAT 138685 || || Sbjct 626874 GTAAT 626870 Score = 84.2 bits (92), Expect = 3e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139311 AGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTA 139370 || ||||| || || || || || ||||| || || | | || || |||||||| Sbjct 626214 AGAGCTTGAGCGGTACAAATATTTGAAGTTGCCTTATCACGCTTTATGTGTTGCTCTCTG 626155 Query 139371 GTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATT 139430 ||||| || || || | | || | || ||| || ||| ||| ||| |||||| Sbjct 626154 GTTTGGAGGGCCAAACGCAAGGCCGTTTTCCCTAAGCGGTCTTTAGACACACCGACAATT 626095 Query 139431 CTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCT 139490 ||||| || || ||||| || |||| || | ||||| || |||||||||||||| Sbjct 626094 CTGCCTGGAATTTTTCTATTTAACTTATCAATGACAGCAAAAAAGGCAGCATGAGGACCA 626035 Query 139491 CCGTATCCCATAGGAATACCAAACCTTTG 139519 || || ||||| || | |||||| | ||| Sbjct 626034 CCATAACCCATTGGGACACCAAATCGTTG 626006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998276962840