Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 351 1e-91 seq9 233 2e-56 seq10 82.4 9e-11 >seq5 Length=571131 Score = 351 bits (388), Expect = 1e-91 Identities = 917/1385 (66%), Gaps = 34/1385 (2%) Strand=Plus/Plus Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286 ||| | |||||| | ||||||||||| |||||| || ||| | || ||||| || Sbjct 297850 ATGAGAGTCGCACTGGGCATCCACGGTAGAGACATCGAAGCTGCTCTAGAAACATATAAC 297909 Query 75287 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345 ||||| | || || || | ||| || | ||||| | || ||||||||||| || Sbjct 297910 TTAATGTCTCTAAAATACTTT-ACTCATGCCTCTCCAACTTTGTTTAATGCTGGTACTCC 297968 Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405 || ||| || |||||| ||| ||| | |||||| ||||||||||| ||| | ||||| Sbjct 297969 AAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCCATGAAGGAGGACTCTATCGAGGGTAT 298028 Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465 || | ||| | | || ||||| || || || ||||| |||||||| | || Sbjct 298029 TTACGACACTTTGAAAGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 298088 Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525 |||||| | | | | | | ||| ||| || ||||| ||| || | || Sbjct 298089 TATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACGG 298148 Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585 | ||||| ||| |||| || ||||| || || || ||||| | || | | || Sbjct 298149 GTTAATTCCCATGATTCGTGTTTTTAATAATACCGCCCGTTATGTCGACCAGG-GTGGTA 298207 Query 75586 TCGCAAGG---GGT-CCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGT 75641 | ||| ||| || | || | ||| |||||||||||||||| |||||| | || | Sbjct 298208 ACAAAAGACCTGGTGCCTTTGCTCTGTACCTGGAACCATGGCATGCTGATATCTTTGATT 298267 Query 75642 TCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCAT 75701 | |||| | || ||||| ||| | ||||| ||| |||||| | ||| | Sbjct 298268 TTATTGATATCAGAAAGAACCACGGTAAAGAAGAAATTCGTGCAAGAGATTTGTTTCCTG 298327 Query 75702 CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTT 75761 | ||||||||||| || |||||||||||||| || || ||| ||| ||| || | | Sbjct 298328 CTCTGTGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAGAATGGGACTTGGACTTTGT 298387 Query 75762 TCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTC 75820 ||| |||| ||| || || ||||| |||| ||||| ||||||||||| || Sbjct 298388 TCTCTCCA-ACAGCCGCTCCCGGTCTAAGCGACTGTTACGGTGACGAGTTTGAAGCTCTA 298446 Query 75821 TACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGG 75880 || || || ||| | || ||| | | || ||| | ||| | | ||| Sbjct 298447 TATACCCGCTACGAAAAAGAAGGTCGTGGTAA---GACCATTAAAGCTCAAAAATTATGG 298503 Query 75881 AAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCT 75940 | | ||| | || |||| || || || || ||||| | | || |||| || |||||| Sbjct 298504 TATTCCATTTTGGAAGCACAAACTGAAACGGGTACACCTTTTGTGGTTTATAAAGATGCT 298563 Query 75941 TGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACG 76000 || |||| ||| ||||||||| || ||||| |||||| ||||| | ||| Sbjct 298564 TGCAACAGAAAGTCTAACCAAAAAAACTTGGGTGTTATCAAGTCATCAAACTTATGCTGT 298623 Query 76001 GAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCC 76060 |||||| | |||||| ||| | ||| || || |||||||| || ||||| || | ||| Sbjct 298624 GAAATTGTTGAGTACTCAGCTCCGGACGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCC 298683 Query 76061 CTTCCAAAGTATGTCAATGAA------GAGACTCGC---ACTTTTGATTA-----TGAAA 76106 | ||| || ||| |||| ||| || |||| | ||| | ||| Sbjct 298684 TTGCCAGCGT---TCATTGAAACGTCAGAGGACGGCCAAACTTCTACTTACAACTTCAAA 298740 Query 76107 AACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAAT 76165 || || || ||||| | || ||||||| ||| ||||| |||| ||||| | ||| Sbjct 298741 AAATTACACGAAATTGCCAAAGTTGTTACTCGTAATTTAAACAGAGTTATTGATCGTAAT 298800 Query 76166 TTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGT 76225 | || || ||||| ||| ||| || |||||| |||| ||||| |||| |||||| Sbjct 298801 TACTACCCTGTTGAAGAAGCGAGAAGATCCAATATGAGACATAGACCAATTGCCTTGGGT 298860 Query 76226 GTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCC 76285 ||||||||| | || || ||||| ||| || | | |||||||| || || ||| Sbjct 298861 GTTCAAGGTTTAGCTGACACTTTTATGTTGCTACGTTTACCCTTTGATTCTGAAGAGGCC 298920 Query 76286 AAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGT 76345 | ||| | || |||||||| || ||||| || ||| |||| || |||| Sbjct 298921 CGTTTACTAAATATCCAAATATTTGAAACAATTTATCATGCCTCCATGGAAGCTTCTTGT 298980 Query 76346 GAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGG 76405 ||| | ||| || | || | || || || || | |||||||| || || ||||| Sbjct 298981 GAACTAGCTCAAAAGGACGGCCCATACGAAACCTTCCAAGGTTCTCCAGCTTCTCAAGGT 299040 Query 76406 GTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCTC 76465 | |||||||| ||||||||||| || || | || | || ||||| | | Sbjct 299041 ATACTTCAGTTCGATATGTGGGATCAAAAACCCTACGGCATGTGGGATTGGGACACTTTG 299100 Query 76466 AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAA 76523 | | || |||| | | | ||| || | ||| ||||| |||||||||||||| | Sbjct 299101 AGGAAAGATATCATGAAACATGGTATTAGAAAC--TCTTTGACCATGGCACCAATGCCTA 299158 Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583 | || ||||| | ||||| |||||| |||||||||| ||||||||| || | |||| Sbjct 299159 CCGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTTGAACCAGTTACCTCCAACA 299218 Query 76584 TCTAC 76588 | ||| Sbjct 299219 TGTAC 299223 >seq9 Length=431692 Score = 233 bits (258), Expect = 2e-56 Identities = 913/1410 (65%), Gaps = 54/1410 (4%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| || || | ||||| || || | || |||||||| || ||||| ||||| Sbjct 227614 CCACAGCACTTGGTTATGCGTGTGGCGCTGGGTATCCACGGTAGTGATATTGAGTCTGTG 227555 Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 || |||| ||| | |||||| ||| ||| |||| |||||| | |||||| | || Sbjct 227554 CTGAAGACCTACAATTTGATGTCGTTAAGATAT-TTCACTCACGCTTCCCCAACCTTATT 227496 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| |||||||| ||| || || ||||| || ||||| || |||| ||||| || Sbjct 227495 CAACGCTGGTACTCCACATCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAAGGATGA 227436 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| || | ||||| |||| ||| | | || ||||| || || ||| || || Sbjct 227435 CTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAGACTGCAGG 227376 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||| |||| | || || | | | | ||| ||| ||| || || || Sbjct 227375 TGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATCGCCGGTACCAA 227316 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| ||| |||| | ||||| ||| | || || || ||| || || || ||||| Sbjct 227315 CGGTACTTCAAATGGGTTGATTCCTATGATCCGTGTTTTCAACAATACTGCTCGTTATGT 227256 Query 75571 AAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGGCA 75624 | |||| || | |||| || || | || | | ||||||||||||||| Sbjct 227255 GGACCAAGGAGG---TAACAAGAGACCTGGCGCCTTTGCCCTTTTCTTGGAACCATGGCA 227199 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 ||| |||||| | || || | || | || | ||| ||| | ||||| || ||| Sbjct 227198 TGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGAAA-TCCGTG 227140 Query 75685 TA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | | ||| | || | | ||||||||||| |||||||| ||||| || ||| | |||| Sbjct 227139 CAAGGGATTTGTTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCAAGAGG 227080 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 ||| | ||| || | || | ||| || |||||| | || | ||||| Sbjct 227079 ATGGGCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATGTCTGGGGTG 227020 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 | || ||||||| || || || || ||| ||| ||| | | || | | | Sbjct 227019 ATGAATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTGGTAAAACCATTA--- 226963 Query 75864 CAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 || | | | ||| ||| | || ||| | || |||| || || || || ||||| | Sbjct 226962 -AGGCCCAAAAGTTATGGTATGCAATTTTACAAGCACAAACAGAAACAGGTACACCTTTC 226904 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||| |||||||||| | ||||| | |||| |||||| |||| ||||| || || || Sbjct 226903 ATGGTTTACAAGGACTCATGTAATAGAAAGACAAACCAACAGAACTTGGGTACCATTAAA 226844 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 || ||| | || ||||| | ||||| | ||||| || || ||||| Sbjct 226843 TCATCCAATTTGTGTTGTGAAATCGTCGAGTATTCCTCCCCAGATGAAACCGCCGTTTGT 226784 Query 76043 AATTTGGCATCAATCGCCCTTCCAAAGTATGTCAA------TGAAGAG------ACTCGC 76090 ||| | || || || ||||| ||| | |||| | |||||| ||| Sbjct 226783 AATCTAGCCTCTATTGCCCTCCCAGCATTTGTCGAGATGTCTGAAGATGGTAAAACTGCA 226724 Query 76091 ACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGA 76150 | || | ||| || | | |||||||| | || | ||||| | || | ||| || Sbjct 226723 AGTTATAATTTCGAGAGTTTACATGAAATTGCTAAAGTAATTACCCATAACTTGAACAGA 226664 Query 76151 GTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGA 76210 ||||| || | |||| |||||| ||| || |||| || |||||| || ||| Sbjct 226663 GTCATCGATCGTAATTATTATCCAGTTCCTGAAGCCAGAAATTCAAATATGAAGCATAGA 226604 Query 76211 CCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACGCATT 76269 ||||||| ||||||||||||||||| || ||| | ||| || ||| |||| | || Sbjct 226603 CCTATTGCCTTGGGTGTTCAAGGTCTGGCCGATACCTATATGATGTTGCGTCTAC-CCTT 226545 Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329 ||| || || ||||| | |||| | || || |||||||| ||||| || | Sbjct 226544 TGAATCGGAAGAAGCTCAAACTTTGAACAAACAGATTTTCGAAACCATCTATCATGCTAC 226485 Query 76330 CCTGGAGGCGAGTTGTGAATTGG--CTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGT 76387 || || || |||||||||| | |||| ||||| ||| || || || ||| Sbjct 226484 TCTTGAAGCCTCCTGTGAATTGGCACAGAAG--GAAGGTAAGTATTCCACTTTCGAAGGT 226427 Query 76388 TCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AGCTCA 76445 ||||| || || | || | || || ||||| |||| |||| | || ||| | | | Sbjct 226426 TCTCCAGCCTCTAAGGGTATTCTACAATTTGACATGT-GGAACGCTAAGCCATTTGGT-A 226369 Query 76446 ACTACGACTGGGATGTTCTCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTAACAGT 76501 | || ||||| ||| ||| || | || |||| | | || | | | ||| | Sbjct 226368 TGTGGGATTGGGA-AATCTTAAGAAAGGACATTGTCAA--ACATGGAT-TAAGAAAC--T 226315 Query 76502 CTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAA 76558 |||| ||||| ||||||||||| ||||| || | |||| |||||||| |||| ||| Sbjct 226314 CTTTAACAATGGCGCCAATGCCAACTGCCTCGACTTCTCAAATTCTTGGGT-ATAACGAA 226256 Query 76559 TGCTTTGAACCATACACAACAAACATCTAC 76588 || ||||||||| || ||||||| ||| Sbjct 226255 TGTTTTGAACCAGTGACTTCAAACATGTAC 226226 >seq10 Length=707288 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTG 65148 || ||||| | | | || ||| ||||||||||||| || ||| | | |||| |||||| Sbjct 371223 GCCTTTGCTTCTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTG 371282 Query 65149 AAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAG 65208 |||||| | ||| | |||||||| | |||||| || ||| | |||| | |||| || Sbjct 371283 AAGAAGAGAGGTATGATGCCAGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAA 371342 Query 65209 GGTCTCCACCAGGAGTTTGC 65228 ||| | ||| || ||||| Sbjct 371343 GGTTTGCACACCGACTTTGC 371362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569473228960