Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq12 176 8e-39 seq11 129 1e-24 seq9 123 4e-23 >seq12 Length=1029308 Score = 176 bits (194), Expect = 8e-39 Identities = 181/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||| | |||| || | |||| ||| || |||||| Sbjct 66303 AATTTGCATACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATATT 66362 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || |||||||||||||| ||| || | |||||| ||||||||||| ||||||||||| Sbjct 66363 GTAATCGGATAACGTTCTGCCATCTTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTG 66422 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || ||||| |||||||| ||||| | || | || || || ||||| Sbjct 66423 GTCTGGAGGAATACCTTCCTTATCTTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGA 66482 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| || || || ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct 66483 AGATTCGACCTCCAGAGTAATAGTCTTACCAGTCAGCGTCTTGACAAAGATCTGCAT 66539 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | || | || | ||| || || | |||||| || || |||||| Sbjct 66082 ATACCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCTTTTTGGATGTTGTAGTCG 66141 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || ||||| ||| || | ||| || ||||||||||| ||||||||||| || ||| Sbjct 66142 GACAAGGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGA 66201 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| || || ||||| | || | || |||||| |||||||| ||| Sbjct 66202 GGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCA 66261 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 66262 ACCTCTAGGGTTATAGTTTTGCCAGTTAGAGTTTTGACAAAAATTTGCAT 66311 Score = 159 bits (176), Expect = 6e-34 Identities = 183/245 (75%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||||| || || | |||||| |||| ||||| ||| ||||| || Sbjct 66538 ATACCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCA 66597 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||||| ||| || | ||| || ||||||||||| || |||||||| || ||| Sbjct 66598 GACAGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGA 66657 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| || || ||||| | || | || ||| ||||| ||||| || Sbjct 66658 GGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCG 66717 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--TTTATTAG 193368 ||||| | ||||| |||||||| || | || || ||||| |||||||| | | |||| Sbjct 66718 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCATAATGTCTTAG 66777 Query 193369 TAAAA 193373 | ||| Sbjct 66778 TTAAA 66782 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||||||||| | |||| ||||| || | || || || || ||||| || Sbjct 475696 ACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 475637 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || ||||| ||| || ||||| || || ||||| || ||||| ||||| ||||| || Sbjct 475636 CAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 475577 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| || ||||| || |||| || | ||| |||||| || ||||| ||||| Sbjct 475576 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 475517 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 |||||| || ||||| ||||| |||| || || || || |||||||| || Sbjct 475516 TTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 475466 Score = 143 bits (158), Expect = 5e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191 ||||||| ||||| | | ||||| || | |||| || || ||| || ||||||| Sbjct 65855 TACCACCCCTCAACCTTAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGG 65914 Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251 | || ||||| ||| || | |||||| || |||||||| ||||||||||| || || | Sbjct 65915 ACAAGGTTCTGCCATCTTCCAGTTGTTTACCAGCAAAAATCAATCTCTGTTGGTCTGGTG 65974 Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311 | || ||||| |||||||| ||||| | || | || |||||| |||||||| || | Sbjct 65975 GAATACCTTCCTTATCTTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCGA 66034 Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || || ||||| || ||||| || ||||| || || || || ||||| Sbjct 66035 CCTCGAGGGTTATTGTCTTACCAGTCAGCGTCTTAACGAAGATCTGCAT 66083 >seq11 Length=687600 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| |||| | |||| ||| || || | || || || || ||||| Sbjct 621649 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 621708 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| |||||| || || ||||| || |||||||| || ||||| ||||| ||||| Sbjct 621709 GATAAAGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGT 621768 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || |||| || | ||| ||| || || ||||| ||| Sbjct 621769 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 621828 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336 ||||||| ||| || || ||||| || Sbjct 621829 ACTTCTAAAGTGATGGTCTTACCAGT 621854 >seq9 Length=431692 Score = 123 bits (136), Expect = 4e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||||| | || | || || || | ||||| ||| || ||||| Sbjct 62940 ATACCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCA 62881 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || |||||| || || ||||| || || ||||| || ||||| ||||| ||||| Sbjct 62880 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 62821 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | || | ||| |||||| || ||||| ||| Sbjct 62820 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 62761 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351 ||||| | ||| || || ||||| || | || || ||||| Sbjct 62760 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 62720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654208823440