Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq9 152 2e-31
seq5 147 6e-30
seq13 118 3e-21
seq4 107 6e-18
seq15 84.2 6e-11
>seq9
Length=431692
Score = 152 bits (168), Expect = 2e-31
Identities = 222/311 (71%), Gaps = 2/311 (1%)
Strand=Plus/Plus
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|| || || || || ||||| |||||||| || ||||| |||| | ||||||||| |
Sbjct 227241 TTACCTCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGGATCATAGGAATCAAC 227300
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
||||| ||||| || ||||| ||| |||| ||||| | || || | || | ||||
Sbjct 227301 CCATTTGAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATA 227360
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
|| || |||| |||||||| || ||||| ||| ||||| || | ||||| ||
Sbjct 227361 TGAAGACCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAA 227420
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
|||||||||||||| ||||| | ||| | | ||| | || ||| | ||| || ||
Sbjct 227421 ATACCTTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGT 227480
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTATTAGACATATA 156358
|| || ||||||||||||| || || | || ||| | ||||| |||| ||||| |
Sbjct 227481 GGAGTACCAGCGTTGAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTA-ACGACATCAA 227539
Query 156359 ATCGTATGTCT 156369
|| ||| ||||
Sbjct 227540 ATTGTAGGTCT 227550
>seq5
Length=571131
Score = 147 bits (162), Expect = 6e-30
Identities = 241/347 (69%), Gaps = 3/347 (1%)
Strand=Plus/Minus
Query 156012 ATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCC 156068
||||||| ||| ||| ||||| |||| |||||| |||| || ||| ||||||
Sbjct 298259 ATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCC 298200
Query 156069 TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAA 156128
|| || ||||| || || || ||||| || |||| | ||| ||||| | || || |||
Sbjct 298199 TGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAA 298140
Query 156129 GTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCA 156188
|| || || || || ||| | ||||||| ||| |||| ||||| |||||||| |||
Sbjct 298139 GTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCA 298080
Query 156189 ATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCA 156248
|||||||| | ||| ||||| ||| ||||| || | ||| | | ||||||| ||
Sbjct 298079 ATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCG 298020
Query 156249 ATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCA 156308
||||| || || | ||| | | | | || || | ||||||| ||| || |||
Sbjct 298019 ATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCA 297960
Query 156309 GCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|| || || | || || | |||||| |||| || || ||||||
Sbjct 297959 GCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACAT 297913
>seq13
Length=935281
Score = 118 bits (130), Expect = 3e-21
Identities = 210/306 (69%), Gaps = 3/306 (1%)
Strand=Plus/Plus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||| ||||| ||||||| | ||||||| || | ||||||| ||| || || |
Sbjct 433681 CCTGTCAAATCTACCAGGCCTTAGTAATGCTTTATCAAGAATATCGGGTCTATTGGTACC 433740
Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968
|| || ||||||| | || | | | |||| |||||||| | ||| ||||||||
Sbjct 433741 AGCTAAGACAACAACATGGTCAGCTGGAGTAAAGCCATCCATTTCTACTAACATTTGATT 433800
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028
|| || | || || ||||| || | |||| ||| |||| | ||| |||
Sbjct 433801 TAGCGTGTTCTCTCTCTCATCGTTAGCACCTGAAAAATTACCCTTTTG---CCTAGCTTT 433857
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|| | ||| |||||||||||||| || | | | || | ||||| ||| ||| |
Sbjct 433858 CCCTATAGCGTCAATTTCGTCAATAAACACAATCGAAGGTGCATTTTCTCTTGCAGTCTT 433917
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
|||||| |||||||| | | || |||| ||||||| |||||||||||||||| ||| |
Sbjct 433918 AAATAAATCTCTTACTCTTGCAGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 433977
Query 289149 GGATAC 289154
|| ||
Sbjct 433978 AGAAAC 433983
>seq4
Length=1469832
Score = 107 bits (118), Expect = 6e-18
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|||||| ||| |||| ||| | ||| || ||||| | | || | |||||||||
Sbjct 209230 TTTCTTGTGGTGTTATCGTAATGGACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 209289
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
||||||||||| ||| || |||||| ||||| ||||| || ||||| |||||||||||
Sbjct 209290 TGAATATAACCTGTTTCAGCTGTTTTAACAGCGGTATCGATAAGACCTTCACGACCACCC 209349
Query 302659 ATAGCATGGAAGAATAGCTCTT 302680
|| || |||||||| | |||||
Sbjct 209350 ATTGCGTGGAAGAAAAACTCTT 209371
Score = 100 bits (110), Expect = 8e-16
Identities = 134/186 (72%), Gaps = 3/186 (2%)
Strand=Plus/Plus
Query 301767 TAAATAAATAGTACAGGATGGATTCTTTGTGTTTTCCGATAGAGACAGAATTTCTTCAAT 301826
||| |||| ||| | || ||| | || |||||| | | | || |||||||| |
Sbjct 208443 TAAGTAAACAGTCAAAGAAGGAGTTTTCATGTTTTTGGCCACATTCAAAATTTCTTTTAA 208502
Query 301827 ACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATT 301886
||||||||||||| || || || |||||| |||||||||||||| ||||| |||||
Sbjct 208503 ACGGGGAACACCAGAAGTAACTTT---CTTGGAAGCAACACCAGCAAAATGGAAGGTATT 208559
Query 301887 CAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTC 301946
|| || | ||| || | || |||||||| ||| || || | | ||||||||||||
Sbjct 208560 TAGTGTCATTTGTGTGGCCGGTTCACCAATGGATTGGGCTGCTAGAACACCAACCATTTC 208619
Query 301947 TCCTGG 301952
|| ||
Sbjct 208620 ACCAGG 208625
>seq15
Length=1049886
Score = 84.2 bits (92), Expect = 6e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||||| | |||||||||| |||||||| || ||||||||||| | || || |
Sbjct 585110 TGGGCAACAGTCATACGAGATGGAATAGCGTGAGGATTGATGATTAAATCCGGAACAATA 585169
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957
|| || || || || ||||||| ||| || | ||| || | |||||||| ||||||||
Sbjct 585170 CCTTCTGCTGTAAATGGCATAT-CTTCTCTACGATATGTGATACCAATAGTACCCTTTTG 585228
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|| |||||||| || || ||||||||
Sbjct 585229 ACCATGACGAGAGGCAAATTTGTCACCAAT 585258
Score = 84.2 bits (92), Expect = 6e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331
|||||| | ||||| | |||||| | |||||| ||||| | | |||||||||||| |
Sbjct 695257 AGCACCATAGGCAATTACACAATCTCTTTCCATCTCACCCAACCTCAGACCACCATCCCT 695316
Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATT 233391
|| ||||| | | |||||| || || |||| |||||||| |||| | ||
Sbjct 695317 GGATCTACCTTCAGTAGGTTGACGTGTCAAGACAGCCCTTGGACCACGAGCTCTTGCATG 695376
Query 233392 AATTTTATCTTTAACCATATGCTTCA 233417
|| |||||| ||||||||||||||
Sbjct 695377 CATCTTATCTAAAACCATATGCTTCA 695402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817279419729
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |