Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq12 96.9 3e-15 seq9 84.2 2e-11 >seq12 Length=1029308 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||||| ||||||||||| || || ||||| ||| || || || || || Sbjct 66106 AAATGTAAAGTGGACTCTTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCATCTTCCAGT 66165 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || |||| | | ||| ||||| ||||| || ||||| ||||| ||| Sbjct 66166 TGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCTTTGTC-CTGAAT 66224 Query 133575 TTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||||| ||||| | |||| ||||||| | || || || | ||| | |||||||| Sbjct 66225 TTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTTTTGCC 66284 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| || ||||| ||||| Sbjct 66285 AGTTAGAGTTTTGACAAAAATTTGCAT 66311 >seq9 Length=431692 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 148820 GGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTC 148879 ||| |||||||||||||| || ||||| || ||||| |||| | ||||| ||||| || Sbjct 226766 GGCAATAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAGGAATACTCGACGATTTC 226825 Query 148880 GGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCA 148939 |||| |||| |||| || |||| ||||| ||| || |||| || || || Sbjct 226826 ACAACACAAATTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTATTACA 226885 Query 148940 CGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975 | ||||||||| | |||| | ||| || ||||| Sbjct 226886 TGAGTCCTTGTAAACCATGAAAGGTGTACCTGTTTC 226921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420697273080