Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq12 96.9 3e-15
seq9 84.2 2e-11
>seq12
Length=1029308
Score = 96.9 bits (106), Expect = 3e-15
Identities = 147/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||||| ||||||||||| || || ||||| ||| || || || || ||
Sbjct 66106 AAATGTAAAGTGGACTCTTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCATCTTCCAGT 66165
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || || |||| | | ||| ||||| ||||| || ||||| ||||| |||
Sbjct 66166 TGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCTTTGTC-CTGAAT 66224
Query 133575 TTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||||| ||||| | |||| ||||||| | || || || | ||| | ||||||||
Sbjct 66225 TTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTTTTGCC 66284
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||||||| || ||||| |||||
Sbjct 66285 AGTTAGAGTTTTGACAAAAATTTGCAT 66311
>seq9
Length=431692
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 148820 GGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTC 148879
||| |||||||||||||| || ||||| || ||||| |||| | ||||| ||||| ||
Sbjct 226766 GGCAATAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAGGAATACTCGACGATTTC 226825
Query 148880 GGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCA 148939
|||| |||| |||| || |||| ||||| ||| || |||| || || ||
Sbjct 226826 ACAACACAAATTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTATTACA 226885
Query 148940 CGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975
| ||||||||| | |||| | ||| || |||||
Sbjct 226886 TGAGTCCTTGTAAACCATGAAAGGTGTACCTGTTTC 226921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420697273080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |