Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq9 167 6e-36
seq5 156 1e-32
seq4 123 6e-23
seq10 102 2e-16
>seq9
Length=431692
Score = 167 bits (184), Expect = 6e-36
Identities = 405/609 (67%), Gaps = 11/609 (2%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|||||||| ||||| ||| | || ||| | ||||| || | | || || || | |
Sbjct 227680 TATTTTGGGTTCAAGACTTTGGAGCGTTCGTATTTGCTAAGACTGAACGGTGAAGTGGCT 227621
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||||| || || ||| || || | ||||| ||| | ||||| || || ||||||| |
Sbjct 227620 GAACGGCCACAGCACTTGGTTATGCGTGTGGCGCTGGGTATCCACGGTAGTGATATTGAG 227561
Query 110424 GCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTAC 110482
|||| | | || || | || || || | | | | ||| ||| | || ||
Sbjct 227560 TCTGTGCTGAAGACCTACAATTTGATGTCGTTAAGATATTTC-ACTCACGCTTCCCCAAC 227502
Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAA 110542
| |||| ||||| || ||| ||| || |||| || || || | | || ||
Sbjct 227501 CTTATTCAACGCTGGTACTCCACATCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAA 227442
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
||||| ||||||||||||||||||||| || | |||||| |||| | ||||| || |
Sbjct 227441 GGATGACTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAGAC 227382
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
| || || ||||| |||| || | | || || || | ||| | |||||||
Sbjct 227381 TGCAGGTGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATCGCCGG 227322
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || ||| |||||| ||| | |||| ||| | | || |||||| | |||||
Sbjct 227321 TACCAACGGTACTTCAAATGGGTTGATTCCTATGATCCGTGTTTTCAACAATACTGCTCG 227262
Query 110723 ATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779
|||||| | ||||| ||| |||||| |||| | ||||| | | | ||||| ||
Sbjct 227261 TTATGTGGACCAAGGAGGTAACAAGAGACCTGGCGCCTTTGCCCTTTTCTTGGAACCATG 227202
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA- 110838
|||| ||||||| || || || | || || | |||| || || | ||||| |||
Sbjct 227201 GCATGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGG---TAAAGAAGAAAT 227145
Query 110839 --GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
| ||| | ||||| || ||| |||||||| | || | || ||||||||||||||
Sbjct 227144 CCGTGCAAGGGATTTGTTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCA 227085
Query 110897 AGAAAATGG 110905
||| ||||
Sbjct 227084 AGAGGATGG 227076
>seq5
Length=571131
Score = 156 bits (172), Expect = 1e-32
Identities = 560/865 (65%), Gaps = 18/865 (2%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|||||||||||||||||| | |||||| |||||||||| | |||| ||| | |
Sbjct 297769 TATTTTGGTTTCAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGCCAAGTGGCC 297828
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| |||||| | || | | || || | || || || || || || ||
Sbjct 297829 GAACGTCCACAACACTTAATTATGAGAGTCGCACTGGGCATCCACGGTAGAGACATCGAA 297888
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|||| | | ||| ||| | || | | ||| | || |||||| |||| ||
Sbjct 297889 GCTGCTCTAGAAACATATAACTTAATGTCTCTAAAATACTTTACTCATGCCTCTCCAACT 297948
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTT-CTAGGAATTAA 110542
| ||||| || || ||| | ||| || | ||||| |||||| | | || ||
Sbjct 297949 TTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTG-TTTCTTGGTCGCCATGAA 298007
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
|| || ||||| || |||||||| || || | |||||| |||| | ||||| ||||
Sbjct 298008 GGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCCAAAAC 298067
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| | || | ||| | ||||| |||| || | | || ||
Sbjct 298068 TGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGG 298127
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || ||| |||| | || | |||| ||| | | || || || | || ||
Sbjct 298128 TACAAACGGTACTTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAATACCGCCCG 298187
Query 110723 ATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779
||||| | || |||||| || ||| ||| | |||||| | || || ||||| ||
Sbjct 298188 TTATGTCGACCAGGGTGGTAACAAAAGACCTGGTGCCTTTGCTCTGTACCTGGAACCATG 298247
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA- 110838
|||| | ||||| ||||| || | || | | || || || || | ||||| |||
Sbjct 298248 GCATGCTGATATCTTTGATTTTATTGATATCAGAAAGAACCACGG---TAAAGAAGAAAT 298304
Query 110839 --GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
| ||| | ||||| ||| ||| |||||||| | ||| | |||||||| ||||| |
Sbjct 298305 TCGTGCAAGAGATTTGTTTCCTGCTCTGTGGATTCCTGATCTTTTCATGAAGCGTGTCGA 298364
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCC-TCATCGTTCTCCTGGTCTATCTGA-TGTA 110954
||| ||||| | ||| || | | | ||| || | |||| |||||| || |||
Sbjct 298365 AGAGAATGGGACTTGGACTTTGTTCTCTCCAACAGC-CGCTCCCGGTCTAAGCGACTGT- 298422
Query 110955 TATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAA 111014
|| || | |||||||||| || || || ||||||||||| | | ||
Sbjct 298423 TACGGTGACGAGTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGG---TCGTGGTAAG 298479
Query 111015 CAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074
||| ||||||| || | |||| || | ||| ||||| |||||| || ||
Sbjct 298480 ACCATTAAAGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAACGGGTACA 298539
Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134
|||| | | | ||||||||| | || | || ||||| |||| || || ||
Sbjct 298540 CCTTTTGTGGTTTATAAAGATGCTTGCAACAGAAAGTCTAACCAAAAAAACTTGGGTGTT 298599
Query 111135 ATTAAGTCTAGTAATTTGTGCTGTG 111159
|| ||||| || || |||||||
Sbjct 298600 ATCAAGTCATCAAACTTATGCTGTG 298624
>seq4
Length=1469832
Score = 123 bits (136), Expect = 6e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377
|| |||||| ||||||||||| | ||||| ||| |||||||||||||||||||||||
Sbjct 210491 GATAATGATCCAGTTCTGTTCAACCGTCAACCCTCATTGCATAAAATGTCTATGATGGCT 210432
Query 305378 CATAAAGTCAAAGTATTATCTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACGCC 305436
|| | ||| ||||| | || | ||| |||||| |||| ||| | || | | ||
Sbjct 210431 CACAGAGTGAAAGT-TATTCCGTATTCCACATTTAGATTGAATTTGTCTGTTACATCTCC 210373
Query 305437 TTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTAC 305496
|| ||||| ||||| || || || ||||||||| | || |||||||| || ||| ||
Sbjct 210372 ATACAATGCCGATTTCGACGGTGACGAAATGAATCTTCACGTACCTCAGTCCGAGGAAAC 210313
Query 305497 AATGACTGAATTATCAGAAATATGTTCTGT 305526
|| | | ||| | || || ||||| ||||
Sbjct 210312 AAGGGCAGAACTGTCCCAATTATGTGCTGT 210283
Score = 95.1 bits (104), Expect = 3e-14
Identities = 124/167 (74%), Gaps = 6/167 (4%)
Strand=Plus/Minus
Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943
||||||| |||| |||| || | ||||||||||| |||||||| || | ||||| |
Sbjct 210917 TTACAATTTCATGTTGCCACTTATATGGATAATGATATTGCTGGCCAACCA--CAGGC-T 210861
Query 304944 CT-CAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGT 305002
|| |||| || || | || |||| |||| | || | || ||||||||||||
Sbjct 210860 CTACAAAAGTCCGGTCGTCCCGTAAAATCTATTCGTGCTCGTTTGAAGGGTAAAGAGGGT 210801
Query 305003 CGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAG 305049
|||||| | |||||| ||||||| || |||||||||||| |||||
Sbjct 210800 CGTATTAGGGGTAATTTAATGGGTAAGCGTGTTGATTTTTCAGCAAG 210754
>seq10
Length=707288
Score = 102 bits (112), Expect = 2e-16
Identities = 343/528 (65%), Gaps = 17/528 (3%)
Strand=Plus/Plus
Query 131489 TTCTGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACC 131548
|||||||| | |||||| || ||| || | || |||||| |||| ||| | || ||
Sbjct 370842 TTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATTCATGACTGGAACAACAGAA-- 370899
Query 131549 TTGAATGAAAAAGA------TTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGAT 131602
|||| ||||| || |||| |||| | ||||||||| || ||||||| |||
Sbjct 370900 -TGAACGAAAACGAGAGATTTTTTATTTCTAGAGTTCTTGCCTTTTTCGCCGCTTCTGAC 370958
Query 131603 GGCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAA-GAAATTGATATTCCTGAAGT 131661
|| ||||||| |||||| | ||| || ||| | || ||| || | ||||| || |
Sbjct 370959 GGTATTGTTAATGAAAACTTGGTTGAAAACTTC-TCCACCGAAGTTCAAATTCCAGAGGC 371017
Query 131662 AACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATT 131721
|| ||||| || ||| | ||||| ||||||| || | || || ||
Sbjct 371018 AAAGAGTTTCTATGGTTTCCAAATCATGATTGAAAATATTCATTCTGAAACTTACTCCTT 371077
Query 131722 ATTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTG---ATGCTGT 131778
|||||| || | || | || || | | ||| | |||| || |||| |
Sbjct 371078 ATTGATCGATAC-CTACATCAAG--GACCCTAAGGAAAGTGAATTCTTGTTCAATGCCAT 371134
Query 131779 AAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGA 131838
| | | || | ||| |||| || || |||||| | | |||||||||||| |
Sbjct 371135 TCACACTATCCCAGAAATCGGTGAGAAGGCCGAGTGGGCTCTAAGATGGATTCAAGACGC 371194
Query 131839 TTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTC 131898
| ||| ||| | |||||| || || ||||||| | | |||||| | ||||| ||
Sbjct 371195 TGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCTTCTATCGAAGGTGTCTTCTTCTC 371254
Query 131899 AGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATT 131958
||| | ||| | || || ||| | |||||| | || ||||||| || | | ||
Sbjct 371255 CGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAGGTATGATGCCAGGTTTGACCTT 371314
Query 131959 GTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006
|| || |||| || | ||||| |||| ||||| || || |||||
Sbjct 371315 CTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGACTTTGC 371362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812541497337
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |