Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq12 107 2e-18
>seq12
Length=1029308
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971
|| || ||||||| | ||||||||||| |||||||||||| || ||| | ||||
Sbjct 66100 AACACTAAATGTAAAGTGGACTCTTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCATCT 66159
Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031
|| || || ||||||| | | || | | |||||| |||||||| || |||||||| ||
Sbjct 66160 TCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCC 66219
Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091
||||||| || | | || | ||| |||| | || || || | || | |||
Sbjct 66220 TGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTT 66279
Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| ||||| |||||||| | ||||| |||||
Sbjct 66280 TTGCCAGTTAGAGTTTTGACAAAAATTTGCAT 66311
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| || |||||||||||||||||| || ||| | |||||| || |||||||| | |
Sbjct 65890 GATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTGCCATCTTCCAGTTGTTTACCAGCA 65949
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || | | |||||| ||||| || || ||||| ||||| ||||||| || |
Sbjct 65950 AAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTTGACTTGACG 66009
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||| |||| | || || |||| || | || ||||||||||| || ||
Sbjct 66010 TTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATTGTCTTACCAGTCAGCGTCTTA 66069
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 66070 ACGAAGATCTGCAT 66083
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| | ||| ||||| || | | ||||| |||||||| ||||| ||| | || |
Sbjct 66321 CAATCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATATTGTAATCGGATAACGTTCT 66380
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||| || |||||||||| | | || | | |||||| |||||||| || |||||
Sbjct 66381 GCCATCTTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTC 66440
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||||| ||||||| || | | || | || |||| | || || || | ||
Sbjct 66441 CTTATCTTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCGACCTCCAGAGT 66500
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || ||||||||||| || || | || ||||||||
Sbjct 66501 AATAGTCTTACCAGTCAGCGTCTTGACAAAGATCTGCAT 66539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611098720120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |