Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq12 125 6e-24
seq9 89.7 5e-13
>seq12
Length=1029308
Score = 125 bits (138), Expect = 6e-24
Identities = 176/244 (72%), Gaps = 5/244 (2%)
Strand=Plus/Minus
Query 25161 TTCAATTAA-ACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATC 25219
|| || ||| ||| |||||| | ||||| || || || ||||| ||| | || || |
Sbjct 66782 TTTAACTAAGACATTATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTG 66723
Query 25220 GAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGT 25279
||||||||| | ||||| || || | || || ||||||| || ||||| |||
Sbjct 66722 GAAGTCGAATCTTCTGATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGT 66663
Query 25280 ATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA- 25338
|| || || || || || || | |||| | ||| || ||||| ||||||| |||||
Sbjct 66662 ATTCCTCCAGACCAACAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACA 66603
Query 25339 -TGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAG 25397
|||| | |||| || ||||| |||||||| ||| | ||||||||| | ||||||||||
Sbjct 66602 CTGTCTG--ATTATAACATTCAGAAAGAATCTACCTTGCATTTAGTGCTGAGATTGAGAG 66545
Query 25398 GAGG 25401
| ||
Sbjct 66544 GTGG 66541
Score = 120 bits (132), Expect = 3e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| ||||| |||| || ||| | || || | || || ||| | |
Sbjct 66311 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 66252
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || || ||||||| || ||||| ||||| || || || ||
Sbjct 66251 GACACTATTGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 66192
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|| ||| | |||| | ||| || ||||| ||||||| |||| |||| ||| ||||
Sbjct 66191 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGAACCTTGTC--CGACTACA 66134
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || |||||||| ||||| | ||||||||||||||| | ||||| ||
Sbjct 66133 ACATCCAAAAAGAGTCCACTTTACATTTAGTGTTAAGACTAAGAGGTGG 66085
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| || || | || || || | || || | || |||||| | |
Sbjct 66539 ATGCAGATCTTTGTCAAGACGCTGACTGGTAAGACTATTACTCTGGAGGTCGAATCTTCC 66480
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || || ||||||| ||||| || ||||| || || || ||
Sbjct 66479 GACACGATCGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 66420
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| ||| | |||| | ||| |||||||| ||||||| |||| | ||||||||||
Sbjct 66419 CAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGCAGAACGTTATCCGATTACAAT 66360
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||| || || || |||| || || || ||||||||||| ||
Sbjct 66359 ATTCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 66313
>seq9
Length=431692
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243
||||| || || || || || || | ||||| | ||||| ||| | || |||||
Sbjct 62720 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 62779
Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303
|| | || || ||| ||| || || || ||||| || || || || |||||| |
Sbjct 62780 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 62839
Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361
|| | | || || ||| | ||||| | ||||| |||| | | ||||| |||||||
Sbjct 62840 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTG--ACTACAACATTCAAA 62897
Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||||| | || ||||| || ||||||||||| ||
Sbjct 62898 AAGAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGG 62937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094305417440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |