Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5 214 2e-50
seq2 118 1e-21
>seq5
Length=571131
Score = 214 bits (236), Expect = 2e-50
Identities = 813/1269 (64%), Gaps = 24/1269 (2%)
Strand=Plus/Minus
Query 118199 TGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGC 118258
||| ||||| || ||||| | |||||| ||||||| |||||| || || ||||| |||||
Sbjct 299205 TGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGATGCGGTAGGCATTGGTGC 299146
Query 118259 CATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTC 118318
|||| | ||| | | ||| | || | | || || | | | || |||||| ||
Sbjct 299145 CATGGTCAAAGAGTTTCTAATACCATGTTTCATGATATCTTTCCTCAAAGTGTCCCAATC 299086
Query 118319 GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGG 118378
| || | | | | ||||||||| ||||| || |||||||| || |||||
Sbjct 299085 CCACATGCCGTAGGGTTTTTGATCCCACATATCGAACTGAAGTATACCTTGAGAAGCTGG 299026
Query 118379 CGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAG 118438
|| || | || || || |||||||| || | || | ||| | || || |
Sbjct 299025 AGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCAT 298966
Query 118439 GGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC 118498
|| || ||||| ||||||||||| || | ||| | | |||||| || |||||
Sbjct 298965 GGAGGCATGATAAATTGTTTCAAATATTTGGATATTTAGTAAACGGGCCTCTTCAGAATC 298906
Query 118499 AAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGG 118558
||| | | || ||| ||||| || || | |||||| ||||| | | |||||||
Sbjct 298905 AAAGGGTAAACGTAGCAACATAAAAGTGTCAGCTAAACCTTGAACACCCAAGGCAATTGG 298846
Query 118559 GCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAAC 118618
| |||||||||||| || | | || || || || || |||| | ||| |||||
Sbjct 298845 TCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAAC 298786
Query 118619 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT 118678
|| |||| ||| || ||||| || | ||||| || | |||| | | | || |
Sbjct 298785 TCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTAAGT 298726
Query 118679 GCGAGTCT---CTTCAT-TGACAT--------ACTTAGGAAGGGCGATTGACGCCAGATT 118726
||| | | || | |||| | || || | ||| | || |||| ||
Sbjct 298725 AGAAGTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGGCAAGGCAACGGAAGCCAAGTT 298666
Query 118727 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACT 118786
||| |||| || || ||| | | | |||||| | |||||| ||| ||||||||
Sbjct 298665 ACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTTGATGA 298606
Query 118787 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 118846
||| || |||||||| ||||| || |||||| |||| || ||||| || |||| ||
Sbjct 298605 CTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCTTTATAAACCAC 298546
Query 118847 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGG 118906
| || || ||||| || ||||| | | | ||| | | ||| | | ||||
Sbjct 298545 AAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAATTTTTGAGCT-- 298488
Query 118907 CACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTC 118966
| ||| || | || || |||| ||||| || || || ||||||||||| ||
Sbjct 298487 -TTAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAACTCGTC 298429
Query 118967 ACC--CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 119024
||| || | | || ||| || || || ||| |||| | || ||| |||
Sbjct 298428 ACCGTAACAGTCGCTTAGA--CCGGGAGCGGCTGTTGGAGAGAACAAAGTCCAAGTCCCA 298371
Query 119025 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGA 119084
||| || || ||||||||||| || || || ||||| || || | || | ||| |
Sbjct 298370 TTCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCACAGAGCAGGAAACAAATCTCTT 298311
Query 119085 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 119144
||| |||||| | || || || | | || | ||| || | |||||| ||
Sbjct 298310 GCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAGATATCAGCA 298251
Query 119145 TGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCTGGTTTAC 119200
||||| ||||||||||||| || | | ||| ||| | |||| |||||| ||
Sbjct 298250 TGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTG-TTACCACCCTGGTCGAC 298192
Query 119201 ATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATT 119260
||| | || || ||||| ||||||| ||| ||||| | || | || || ||
Sbjct 298191 ATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAAGTACCGTT 298132
Query 119261 TGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCC 119320
||| || ||| ||| | | | | | | ||||| || | ||||||||| ||
Sbjct 298131 TGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACC 298072
Query 119321 TGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC 119380
|| || || || || || || | | | || |||| || || ||||| |||||
Sbjct 298071 AGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTC 298012
Query 119381 ACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAA 119440
|||| | |||| | ||| || ||||||||||| | || |||||||| || ||
Sbjct 298011 CTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAA 297952
Query 119441 GAGAGTTGG 119449
| ||||||
Sbjct 297951 CAAAGTTGG 297943
>seq2
Length=789597
Score = 118 bits (130), Expect = 1e-21
Identities = 122/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 167948 CTACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATCCAAGTTGGTGC 168007
|||||||||| | ||||||||||| ||||| || ||||| | ||||| ||| |||||
Sbjct 703696 CTACGGTCGCATTGCGCCAAGATCAGGACTAGCAGTGAAAAACGGTATTCAAACCGGTGC 703755
Query 168008 GGGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGGCA 168067
||||||||||| ||| || || |||||||| ||||| || | ||||||||| ||
Sbjct 703756 TGGTGTTGTTGACAGAGATTACACTGGTGAAGTTAAAGTAGTCTTATTCAATCACTCACA 703815
Query 168068 CACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAA 168107
| ||||||| ||||| || || |||||| | || |||
Sbjct 703816 GAGAGATTTCGCCATCAAGAAAGGTGATCGCGTAGCCCAA 703855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435068582520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |