Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq5 235 6e-57
seq9 145 9e-30
seq2 91.5 2e-13
>seq5
Length=571131
Score = 235 bits (260), Expect = 6e-57
Identities = 829/1278 (65%), Gaps = 44/1278 (3%)
Strand=Plus/Plus
Query 104330 CCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCC 104389
||||| | || ||||||||||| |||| ||| ||||||||| ||| ||| | |||||
Sbjct 297943 CCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCC 298002
Query 104390 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 104449
| ||||||||||| ||| | ||||| || | ||| | | || ||||| || ||
Sbjct 298003 ATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCC 298062
Query 104450 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 104509
|| ||||| |||||||| | || |||||| | | | | | | ||| |||
Sbjct 298063 AAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTTACATT 298122
Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569
|| ||||| ||| || | || | ||||| ||| |||| || ||||| ||
Sbjct 298123 GCTGGTACAAACGGTACTTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAATACC 298182
Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGA 104625
|| || ||||| | || | | || | |||| || | | || | || || ||
Sbjct 298183 GCCCGTTATGTCGACCAGGGT-GGTAACAAAAGACCTGGTGCCTTTGCTCTGTACCTGGA 298241
Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685
|||||||| || |||||| | || || |||| | | ||||| ||| | || ||
Sbjct 298242 ACCATGGCATGCTGATATCTTTGATTTTATTGATATCAGAAAGAACCACGGTAAAGAAGA 298301
Query 104686 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 104744
| |||| | ||| | || | ||||| |||||||| ||||| ||||||||| | |
Sbjct 298302 AATTC-GTGCAAGAGATTTGTTTCCTGCTCTGTGGATTCCTGATCTTTTCATGAAGCGTG 298360
Query 104745 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCTGGTCTCTCCGAT 104803
| || |||| ||| | |||| || | || | |||| ||| || || ||||| |||
Sbjct 298361 TCGAAGAGAATGGGACTTGGACTTTGTTCTCTCCA-ACAGCCGCTCCCGGTCTAAGCGA- 298418
Query 104804 GCCGT--GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGA 104861
| || ||||| ||||||||||| || || || ||||| |||||||||| |
Sbjct 298419 -CTGTTACGGTGACGAGTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGGTCGTG--- 298474
Query 104862 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921
| ||| | |||| | | ||| | | ||| | | | ||||| || || |
Sbjct 298475 GTAAGACCATTAAAGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAACGG 298534
Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981
||||||| | || |||| ||||| || || ||| |||| ||| ||||| || ||||
Sbjct 298535 GTACACCTTTTGTGGTTTATAAAGATGCTTGCAACAGAAAGTCTAACCAAAAAAACTTGG 298594
Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 105041
|||| |||||| || || | || ||||| | || | ||| || || |
Sbjct 298595 GTGTTATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAGTACTCAGCTCCGGACGAAA 298654
Query 105042 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--ATGTGGATC--CAGA---- 105093
| ||||| |||||| | || || | || | || || || || | | ||||
Sbjct 298655 CTGCTGTTTGTAACTTGGCTTCCGTTGCCTTGCCAGCGTTCAT-TGAAACGTCAGAGGAC 298713
Query 105094 -GACAAA----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAA 105148
| |||| || | | | ||||| | |||||| || | ||| ||| ||
Sbjct 298714 GGCCAAACTTCTACTTACAACTTCAAAAAATTACACGAAATTGCCAAAGTTGTTACTCGT 298773
Query 105149 AACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAAT 105208
|| ||||||||||||||||| | |||| ||||| ||||| || | | ||| |||
Sbjct 298774 AATTTAAACAGAGTTATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAGATCCAAT 298833
Query 105209 ATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCA-TTCTTTG 105267
|||||||| | ||||||| | |||||||| ||| | || || || || | ||
Sbjct 298834 ATGAGACATAGACCAATTGCCTTGGGTGTTCAAGGTTTAGCTGA------CACTTTTATG 298887
Query 105268 TCGCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAG 105322
| || ||| | |||||||| || || || | | ||| | ||||||||
Sbjct 298888 TTGCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTACTAAATATCCAAATATTTGAA 298947
Query 105323 ACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATAT 105382
|| || ||||| ||| | | || || || || | || | || || |||||
Sbjct 298948 ACAATTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAAAAGGACGGCCCATAC 299007
Query 105383 GAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGT 105442
|||||||| | |||||||||||||| ||||| | ||||| || |||||||||| |
Sbjct 299008 GAAACCTTCCAAGGTTCTCCAGCTTCTCAAGGTATACTTCAGTTCGATATGTGGG-ATCA 299066
Query 105443 GAGACCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCT 105501
| ||| | || | || ||||| || | | | || |||| | | | ||| |
Sbjct 299067 AAAACCCTACGGCATGTGGGATTGGGACACTTTGAGGAAAGATATCATGAAACATGGTAT 299126
Query 105502 TCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAA 105561
| | ||| | | |||||| |||||||| || || ||||| | ||||| |||||| |
Sbjct 299127 TAGAAACTCTTTGACCATGGCACCAATGCCTACCGCATCCACATCCCAAATATTGGGTTA 299186
Query 105562 TAATGAATGCTTTGAACC 105579
||||||||| ||||||||
Sbjct 299187 TAATGAATGTTTTGAACC 299204
>seq9
Length=431692
Score = 145 bits (160), Expect = 9e-30
Identities = 882/1392 (63%), Gaps = 56/1392 (4%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| || || | ||||| ||||| | ||||| || || || ||||| |||||
Sbjct 227614 CCACAGCACTTGGTTATGCGTGTGGCGCTGGGTATCCACGGTAGTGATATTGAGTCTGTG 227555
Query 104282 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
|| |||| ||| | |||||| ||| ||| |||| |||||| | |||||| | ||
Sbjct 227554 CTGAAGACCTACAATTTGATGTCGTTAAGATAT-TTCACTCACGCTTCCCCAACCTTATT 227496
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| |||||||| ||| ||||||||||| || ||||| || |||| ||||| ||
Sbjct 227495 CAACGCTGGTACTCCACATCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAAGGATGA 227436
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
||| || | ||||| |||| ||| | | || ||||| || || ||| || ||
Sbjct 227435 CTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAGACTGCAGG 227376
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
||| |||| | || || | | | | ||| ||| ||| || || ||
Sbjct 227375 TGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATCGCCGGTACCAA 227316
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
||| ||| |||| | ||||| ||| | || || || ||| || || || |||||
Sbjct 227315 CGGTACTTCAAATGGGTTGATTCCTATGATCCGTGTTTTCAACAATACTGCTCGTTATGT 227256
Query 104581 AAATCAAGCTGGGCGTCGAAAGGGATCTATCGCAGT-----CTATCTT-GAGCCATGGCA 104634
| ||| || || ||| || || ||| | | |||| || ||||||||
Sbjct 227255 GGACCAA---GGAGGTAACAAGAGACCTGGCGCCTTTGCCCTTTTCTTGGAACCATGGCA 227199
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694
|| |||||| | || || | || | | | ||| ||| | || || | |||
Sbjct 227198 TGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGA-AATCCGTG 227140
Query 104695 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
| | ||| | ||| | ||||| |||||||| || || || ||||| | ||| | |||
Sbjct 227139 CAAGGGATTTGTTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCAAGAGG 227080
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813
||| ||| || | |||| ||| || || ||| | |||| | |||||
Sbjct 227079 ATGGGCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATGTCTGGGGTG 227020
Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873
| || ||||||| || || || ||||| |||||||| | | || |
Sbjct 227019 ATGAATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTG---GTAAAACCATTA 226963
Query 104874 CAGCTGCCGATGTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGTACACCATAC 104932
|| | | ||| | || ||| | |||| | ||||| || || |||||||| | |
Sbjct 226962 AGGCCCAAAAGTTATGGTATGCAATTTTACAAG-CACAAACAGAAACAGGTACACCTTTC 226904
Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992
||| ||||||| ||| | ||||| ||||| || ||| |||| |||||| || ||
Sbjct 226903 ATGGTTTACAAGGACTCATGTAATAGAAAGACAAACCAACAGAACTTGGGTACCATTAAA 226844
Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052
|||||| | ||| |||||| | || | | | | |||||| || || || |||
Sbjct 226843 TCATCCAATTTGTGTTGTGAAATCGTCGAGTATTCCTCCCCAGATGAAACCGCCGTTTGT 226784
Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GAC-AAAGA--------- 105101
|| || || || || || ||||| || || || || ||| | | ||||
Sbjct 226783 AATCTAGCCTCTATTGCCCTCCC--AGCATTTG--TCGAGATGTCTGAAGATGGTAAAAC 226728
Query 105102 --CA---TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156
|| | | ||| || | | || ||| || | ||| | ||| | ||| | ||
Sbjct 226727 TGCAAGTTATAATTTCGAGAGTTTACATGAAATTGCTAAAGTAATTACCCATAACTTGAA 226668
Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216
|||||| || ||| | |||| ||| || ||| || | || || ||||||| ||
Sbjct 226667 CAGAGTCATCGATCGTAATTATTATCCAGTTCCTGAAGCCAGAAATTCAAATATGAAGCA 226608
Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGC 105276
| || |||| | |||||||| ||||| || ||| | || | | || | |
Sbjct 226607 TAGACCTATTGCCTTGGGTGTTCAAGGTCTGGCCGATACCTATATGATGTTGCGTCTACC 226548
Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336
||||| || || ||||| | | || | || || || ||||| ||||| ||
Sbjct 226547 CTTTGAATCGGAAGAAGCTCAAACTTTGAACAAACAGATTTTCGAAACCATCTATCATGC 226488
Query 105337 CGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396
||||||| || | || |||||| || || ||| ||| || || || ||
Sbjct 226487 TACTCTTGAAGCCTCCTGTGAATTGGCACAGAAGGAAGGTAAGTATTCCACTTTCGAAGG 226428
Query 105397 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA 105456
||||||||| || | || | || |||||||| |||||| | | | || ||| ||
Sbjct 226427 TTCTCCAGCCTCTAAGGGTATTCTACAATTTGACATGTGGAACGCTAAG-CCA---TTTG 226372
Query 105457 CTA----CGACTGGGAAGCTCTCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTAAC 105508
|| || |||||| ||| ||| || | || |||| | | || | | | |||
Sbjct 226371 GTATGTGGGATTGGGAA-ATCTTAAGAAAGGACATTGTCAA--ACATGGAT-TAAGAAAC 226316
Query 105509 AGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGA 105567
| | ||||| ||||||||||| ||||| || | |||| |||||||| |||| ||
Sbjct 226315 TCTTTAACAATGGCGCCAATGCCAACTGCCTCGACTTCTCAAATTCTTGGGT-ATAACGA 226257
Query 105568 ATGCTTTGAACC 105579
||| ||||||||
Sbjct 226256 ATGTTTTGAACC 226245
>seq2
Length=789597
Score = 91.5 bits (100), Expect = 2e-13
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 154116 TTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCGGGTGTTGTTG 154175
|||||||| |||| || || || |||||| | ||||| ||| ||||| ||||||||||
Sbjct 703707 TTGCGCCAAGATCAGGACTAGCAGTGAAAAACGGTATTCAAACCGGTGCTGGTGTTGTTG 703766
Query 154176 ATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGACAAAGACTTTG 154235
| || ||||| |||||||| ||||| || | ||||||||| | | | ||| || |
Sbjct 703767 ACAGAGATTACACTGGTGAAGTTAAAGTAGTCTTATTCAATCACTCACAGAGAGATTTCG 703826
Query 154236 AGGTAAAGAGGGGTGAGCGCATCGCACAACTTGTTCTTGA 154275
| |||| ||||| ||| | || ||| | |||| ||
Sbjct 703827 CCATCAAGAAAGGTGATCGCGTAGCCCAATTAATTCTCGA 703866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260676057080
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