Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq10 194 1e-44 >seq10 Length=707288 Score = 194 bits (214), Expect = 1e-44 Identities = 561/855 (66%), Gaps = 24/855 (3%) Strand=Plus/Minus Query 4240 TTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTG 4298 ||| ||| ||||||| |||||||| || || |||| |||||| ||||| || || || Sbjct 371674 TTGGACATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTA 371615 Query 4299 CCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTC 4357 || | || || || ||||||||||| || || || || | ||||| | ||| || Sbjct 371614 CCAGCCAAAGAGATGTTTTCCATAAAGTCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG 371555 Query 4358 ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC 4417 || || || || | | || |||||| || || || | || ||| |||| || || Sbjct 371554 TTACCGAAG-GCAACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 371496 Query 4418 GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTAT 4474 ||| || || | || || |||| |||| ||| || | | ||||| || Sbjct 371495 AGCGTTCATACCTAGCAAGGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 371439 Query 4475 AGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA 4534 || || || |||| || | || | | || |||||| || || | Sbjct 371438 TTCCACAGCCTCGGTGACAATTTTTTCAACAATTGCTGGGTCTGGTTTGTTCTTCAAATG 371379 Query 4535 TCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTT 4594 | |||||||| || ||||| || ||||||||||||||||||| ||||| |||||| Sbjct 371378 GGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTT 371319 Query 4595 AGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGA 4654 ||| || || || || ||||| | ||||||||| || | ||| || || | ||| || || Sbjct 371318 AGAGAAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGA 371259 Query 4655 CCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT 4714 || || ||||| | ||||| | | ||||| || |||| || || ||| || Sbjct 371258 ACCGGAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACAAGGC 371199 Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACG---CACGGAAT 4771 | | ||||| ||||||| ||| ||||| | || |||| | || || || Sbjct 371198 GTCAGCGTCTTGAATCCATCTTAGAGCCCACTCGGC---CTTCTCACCGATTTCTGGGAT 371142 Query 4772 TGTGTATATAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTC 4828 |||| || || || || |||| ||||| | | ||||| | || || || || Sbjct 371141 AGTGTGAATGGCATTGAACAAGAATTCACTTTCCTTA---GGGTCCTTGATGTAGGTATC 371085 Query 4829 TATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA 4888 || | || | || |||||||||| |||||||| || || || || || || || Sbjct 371084 GATCAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAA 371025 Query 4889 GCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTAC 4948 | | || |||| | |||||||||| | | || |||| || |||||||| || || Sbjct 371024 ACTCTTTGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAAC 370965 Query 4949 TATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGG 5008 ||||||||| || || ||||| || | ||| ||| ||||| | |||| Sbjct 370964 AATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTC 370905 Query 5009 CTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCA 5065 || | | || ||||||| | | ||| |||| ||||||| ||||||| | ||||| Sbjct 370904 GTTCATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 370845 Query 5066 AAACGACGCTTCCGC 5080 || || ||||| || Sbjct 370844 GAAAGAGGCTTCGGC 370830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049511520661