Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq10 194 1e-44
>seq10
Length=707288
Score = 194 bits (214), Expect = 1e-44
Identities = 561/855 (66%), Gaps = 24/855 (3%)
Strand=Plus/Minus
Query 4240 TTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTG 4298
||| ||| ||||||| |||||||| || || |||| |||||| ||||| || || ||
Sbjct 371674 TTGGACATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTA 371615
Query 4299 CCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTC 4357
|| | || || || ||||||||||| || || || || | ||||| | ||| ||
Sbjct 371614 CCAGCCAAAGAGATGTTTTCCATAAAGTCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG 371555
Query 4358 ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC 4417
|| || || || | | || |||||| || || || | || ||| |||| || ||
Sbjct 371554 TTACCGAAG-GCAACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 371496
Query 4418 GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTAT 4474
||| || || | || || |||| |||| ||| || | | ||||| ||
Sbjct 371495 AGCGTTCATACCTAGCAAGGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 371439
Query 4475 AGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA 4534
|| || || |||| || | || | | || |||||| || || |
Sbjct 371438 TTCCACAGCCTCGGTGACAATTTTTTCAACAATTGCTGGGTCTGGTTTGTTCTTCAAATG 371379
Query 4535 TCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTT 4594
| |||||||| || ||||| || ||||||||||||||||||| ||||| ||||||
Sbjct 371378 GGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTT 371319
Query 4595 AGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGA 4654
||| || || || || ||||| | ||||||||| || | ||| || || | ||| || ||
Sbjct 371318 AGAGAAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGA 371259
Query 4655 CCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT 4714
|| || ||||| | ||||| | | ||||| || |||| || || ||| ||
Sbjct 371258 ACCGGAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACAAGGC 371199
Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACG---CACGGAAT 4771
| | ||||| ||||||| ||| ||||| | || |||| | || || ||
Sbjct 371198 GTCAGCGTCTTGAATCCATCTTAGAGCCCACTCGGC---CTTCTCACCGATTTCTGGGAT 371142
Query 4772 TGTGTATATAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTC 4828
|||| || || || || |||| ||||| | | ||||| | || || || ||
Sbjct 371141 AGTGTGAATGGCATTGAACAAGAATTCACTTTCCTTA---GGGTCCTTGATGTAGGTATC 371085
Query 4829 TATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA 4888
|| | || | || |||||||||| |||||||| || || || || || || ||
Sbjct 371084 GATCAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAA 371025
Query 4889 GCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTAC 4948
| | || |||| | |||||||||| | | || |||| || |||||||| || ||
Sbjct 371024 ACTCTTTGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAAC 370965
Query 4949 TATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGG 5008
||||||||| || || ||||| || | ||| ||| ||||| | ||||
Sbjct 370964 AATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTC 370905
Query 5009 CTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCA 5065
|| | | || ||||||| | | ||| |||| ||||||| ||||||| | |||||
Sbjct 370904 GTTCATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 370845
Query 5066 AAACGACGCTTCCGC 5080
|| || ||||| ||
Sbjct 370844 GAAAGAGGCTTCGGC 370830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049511520661
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |