Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq12 159 8e-34
seq9 105 2e-17
>seq12
Length=1029308
Score = 159 bits (176), Expect = 8e-34
Identities = 169/220 (77%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || |||||||| || || ||||| || ||||| ||||| ||| || |||
Sbjct 66308 CAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCCGAC 66249
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| ||| ||||||||||||||||| || ||||| ||||| ||
Sbjct 66248 ACTATTGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAACAG 66189
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || || ||||| || || || |||||||| || || |||| |||| || ||| |
Sbjct 66188 AGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGAAC-CTTGTCCGACTACAACAT 66130
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||||| || || | ||| | || || ||||| |||
Sbjct 66129 CCAAAAAGAGTCCACTTTACATTTAGTGTTAAGACTAAGA 66090
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || || ||| | || || ||||| || || | || || ||| || ||
Sbjct 66764 CAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCTGAT 66705
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||| ||||||||||||||||| || ||||| ||||| ||
Sbjct 66704 ACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAACAG 66645
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || || ||||| || || || |||||||| || || || | ||||||||| |
Sbjct 66644 AGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACACTGTCTGATTATAACATT 66585
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| |||||||| || ||||| | || ||||| | |||
Sbjct 66584 CAGAAAGAATCTACCTTGCATTTAGTGCTGAGATTGAGA 66546
Score = 123 bits (136), Expect = 6e-23
Identities = 161/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || || ||||| || || ||| || |||
Sbjct 475472 CAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCTTCTGAC 475531
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| || ||||| ||||| ||||| || ||||| |||
Sbjct 475532 ACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAA 475591
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||| || || || || | |||||||| || || |||| | || || ||| |
Sbjct 475592 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAAC-CTTGTCTGACTACAACAT 475650
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||| ||||| || |||| | || |||||| | |||
Sbjct 475651 CCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGA 475690
Score = 120 bits (132), Expect = 7e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || || || || || || || ||||||||||| ||| || |||
Sbjct 66080 CAGATCTTCGTTAAGACGCTGACTGGTAAGACAATAACCCTCGAGGTCGAATCTTCCGAC 66021
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| ||| ||||| || || ||||| || || || ||||| ||
Sbjct 66020 ACTATTGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCACCAGACCAACAG 65961
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || || || || ||||| || |||||||| || || |||| |||| || ||| |
Sbjct 65960 AGATTGATTTTTGCTGGTAAACAACTGGAAGATGGCAGAAC-CTTGTCCGACTACAACAT 65902
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135
||||| ||||| || || || || || || ||
Sbjct 65901 TCAAAAGGAATCTACTCTCCACCTGGTCTTAAG 65869
>seq9
Length=431692
Score = 105 bits (116), Expect = 2e-17
Identities = 154/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||| || || ||| | || || || || ||||| | || || ||| || ||||| ||
Sbjct 62719 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 62778
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
|| || ||||| ||||||||| ||||| ||||| ||||| || ||||| ||| || |
Sbjct 62779 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 62838
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGTCCAAA 178107
||||| || || || || | ||||| || || || |||| | || || ||| | ||||
Sbjct 62839 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAAC-CTTGTCTGACTACAACATTCAAA 62897
Query 178108 AAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||| || | || | || |||||| | |||
Sbjct 62898 AAGAATCCACTTTACACTTAGTCTTGAGATTGAGA 62932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730937812298
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |