Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq12 104 2e-17
>seq12
Length=1029308
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 41650 TAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTC 41709
||| ||||| || || || ||||| |||||||| |||||||| | ||| | | ||
Sbjct 65871 TAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTGCCATC 65930
Query 41710 GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769
|| || || || || || || |||| | ||||||||| | |||| | ||||| ||
Sbjct 65931 TTCCAGTTGTTTACCAGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTATC 65990
Query 41770 CATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828
||| |||||| | ||| | || ||||||| || || ||||| | ||||| |
Sbjct 65991 T-TGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATTG 66049
Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||| ||||||||||| ||||| ||||||||
Sbjct 66050 TCTTACCAGTCAGCGTCTTAACGAAGATCTGCAT 66083
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
|||||| ||||| || || ||||| | || | | || || || || || ||||| ||
Sbjct 66348 CTCCTTTTGAATATTGTAATCGGATAACGTTCTGCCATCTTCCAGTTGTTTACCGGCAAA 66407
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790
|||| | ||||||||| | |||| | ||||| || ||| |||||| | |||
Sbjct 66408 AATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCT-TGAATTTTTGACTTGACGT 66466
Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
| | | |||||| || || ||||||| || || || ||||| ||||||||||| |
Sbjct 66467 TGTCGATCGTGTCGGAAGATTCGACCTCCAGAGTAATAGTCTTACCAGTCAGCGTCTTGA 66526
Query 41850 CGAAAATCTGCAT 41862
| || ||||||||
Sbjct 66527 CAAAGATCTGCAT 66539
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/196 (71%), Gaps = 10/196 (5%)
Strand=Plus/Plus
Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731
|| |||||||||||||| || || || || | | || || || ||||| ||||| ||
Sbjct 66577 TCTTTCTGAATGTTATAATCAGACAGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAA 66636
Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGA 41790
|||| | ||||||||| | |||| | || |||||| ||| |||||| ||| ||
Sbjct 66637 ATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCC-TGAATTTTTGACTT----GA 66691
Query 41791 CGACA-CA---GTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCT 41846
|| | || || || || || || |||| ||||| |||||||| |||| ||||
Sbjct 66692 CGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTACCGGTCAAAGTCT 66751
Query 41847 TTACGAAAATCTGCAT 41862
| || ||||| |||||
Sbjct 66752 TGACAAAAATTTGCAT 66767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303901760400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |