Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq12 104 2e-17 >seq12 Length=1029308 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 41650 TAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTC 41709 ||| ||||| || || || ||||| |||||||| |||||||| | ||| | | || Sbjct 65871 TAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTGCCATC 65930 Query 41710 GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 || || || || || || || |||| | ||||||||| | |||| | ||||| || Sbjct 65931 TTCCAGTTGTTTACCAGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTATC 65990 Query 41770 CATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828 ||| |||||| | ||| | || ||||||| || || ||||| | ||||| | Sbjct 65991 T-TGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATTG 66049 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| ||||||||||| ||||| |||||||| Sbjct 66050 TCTTACCAGTCAGCGTCTTAACGAAGATCTGCAT 66083 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||| ||||| || || ||||| | || | | || || || || || ||||| || Sbjct 66348 CTCCTTTTGAATATTGTAATCGGATAACGTTCTGCCATCTTCCAGTTGTTTACCGGCAAA 66407 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| | ||||||||| | |||| | ||||| || ||| |||||| | ||| Sbjct 66408 AATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCT-TGAATTTTTGACTTGACGT 66466 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | |||||| || || ||||||| || || || ||||| ||||||||||| | Sbjct 66467 TGTCGATCGTGTCGGAAGATTCGACCTCCAGAGTAATAGTCTTACCAGTCAGCGTCTTGA 66526 Query 41850 CGAAAATCTGCAT 41862 | || |||||||| Sbjct 66527 CAAAGATCTGCAT 66539 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/196 (71%), Gaps = 10/196 (5%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 || |||||||||||||| || || || || | | || || || ||||| ||||| || Sbjct 66577 TCTTTCTGAATGTTATAATCAGACAGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAA 66636 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGA 41790 |||| | ||||||||| | |||| | || |||||| ||| |||||| ||| || Sbjct 66637 ATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCC-TGAATTTTTGACTT----GA 66691 Query 41791 CGACA-CA---GTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCT 41846 || | || || || || || || |||| ||||| |||||||| |||| |||| Sbjct 66692 CGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTACCGGTCAAAGTCT 66751 Query 41847 TTACGAAAATCTGCAT 41862 | || ||||| ||||| Sbjct 66752 TGACAAAAATTTGCAT 66767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303901760400