Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq14 118 2e-21 seq10 89.7 1e-12 >seq14 Length=872155 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 319818 ATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCC 319877 |||||||||||| ||| | || | |||| || |||||| || || | |||||| Sbjct 584215 ATCGTGTTCCACATAAACGGTGCGACACTCATCTTGAGTGGGGAAGCCATCGACCTGGCC 584156 Query 319878 GTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTA 319937 || |||||| ||||| || || ||||| || || || ||||| ||||| ||||| || Sbjct 584155 ATTAGCAATAGATCGCATTAGAGTAGATTTTCCGGCACCATTTGGGCCACATAGACCATA 584096 Query 319938 GCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGC 319997 | | || || || | | || | || ||||| || |||||||| |||||||||| Sbjct 584095 TCTTCTACCTCGCTTTAACCTCAATTGAGTCTTGTTTAGCAGAATTTTGGCACCATATGC 584036 Query 319998 CAGAGAAAATTCACAATCACACAGATCCTCACC 320030 || ||||||||||| | ||||| ||| ||||| Sbjct 584035 CAAGGAAAATTCACAGTTACACAAATCTTCACC 584003 >seq10 Length=751133 Score = 89.7 bits (98), Expect = 1e-12 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 230428 GACGCTATTCCATGTCGCCTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGA 230486 ||||| | ||| || ||||| | || ||||||||||| || ||| || ||| | || Sbjct 380593 GACGCCTTACCA-GTTGCCTTGCTAGGTATGAACGCTGACCTAATGAACCAATACGTTGA 380651 Query 230487 ATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAA-CTCTAAGA 230545 ||||| || ||| | |||| ||||| | ||| || ||||| ||||| || || | Sbjct 380652 GTTCGTTGCTGACAGACTTTTGGTTGCCTTCGGTAACAAGAAATACTACAAGGTCGAA-A 380710 Query 230546 ACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGC 230605 ||||||| | |||||||| ||| || | || |||||||||||||| |||||| Sbjct 380711 ACCCCTTCGACTTTATGGAAAACATCTCTTTGGCTGGTAAGACCAACTTCTTTGAAAAGA 380770 Query 230606 GTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 | || ||| || || | | ||||||| ||| Sbjct 380771 GAGTTTCTGATTACCAAAAGGCTGGTGTTATG 380802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823769592710