Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq14 89.7 5e-13
seq10 87.8 2e-12
>seq14
Length=872155
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || ||||| || || || || || ||| |||| |||||| | ||
Sbjct 56884 ATGCAGATCTTCGTTAAGACGCTGACTGGTAAGACTATAACCCTCGAGGTCGAATCTTCC 56825
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| |||||||| || || || || || || | |||||
Sbjct 56824 GACACTATTGACAACG-TCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCA 56766
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || | || | || || ||||| ||||| || | | || | |||||||||
Sbjct 56765 ACAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGTAGAACATTATCCGACTACAA 56706
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||| || ||||| | || || || || || || | |||||||| ||
Sbjct 56705 CATTCAAAAGGAATCTACTCTCCACCTGGTCTTAAGGTTGAGGGGTGG 56658
>seq10
Length=751133
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 116981 GAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGC 117040
||||||||||||||||| || | ||||| | | || ||| || || || |
Sbjct 380290 GAGAAGGCCGAGTGGGCTCTAAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGA 380349
Query 117041 CTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTT 117100
|| || ||||| || | |||| || |||||||| || || |||||| |||| ||
Sbjct 380350 CTAGTCGCCTTTGCTTCTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTC 380409
Query 117101 TGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGG 117160
||| | ||||| | || | ||||| || |||| ||| ||||| | || | |||
Sbjct 380410 TGGTTGAAGAAGAGAGGTATGATGCCAGGTTTGACCTTCTCTAACGAATTGATTTGCAGA 380469
Query 117161 GACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTG 117208
||||| ||| |||| ||||||||| || || ||||| ||||||
Sbjct 380470 GACGAAGGTTTGCACACCGACTTTGCATGCTTATTGTTCGCCCATTTG 380517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219090515920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |