Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq15 150 1e-31 >seq15 Length=1201643 Score = 150 bits (166), Expect = 1e-31 Identities = 368/559 (66%), Gaps = 29/559 (5%) Strand=Plus/Plus Query 96996 AAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAAT 97055 || ||||||| | || || || || ||| || || | || ||| | | || ||||| Sbjct 565239 AATCTTTAGTTTCGGAAATGGTCTTGGATCTCTGGTGATTTGTTCTTTCAAGGCTTCAAT 565298 Query 97056 GTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC 97115 ||| | | ||||| || ||||| || | ||| |||||||| || || || | | || Sbjct 565299 GTGGTCCTTATAAACATGTGCATCCCCCAGAGTATGAATAAACTCACCTGGCTCCATGTC 565358 Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175 || | || ||||| | ||| || |||| ||| ||||| ||||| || || || Sbjct 565359 GACAACTTTAGCAATCATTCTAGTCAACAGAGCATATGATGCAATATTAAATGGTACGCC 565418 Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAG------CTTTCCA----- 97224 | ||||| ||| || | ||| |||||| ||| ||||| ||| ||| Sbjct 565419 CAACCCCATGTCACAAGAACGTTGGTATAACAAACATGAAAGGTGGGGCTTACCAGATCC 565478 Query 97225 -------TC---------ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268 || || |||||||| || || | || || || ||||| || Sbjct 565479 GTCTCCTTCTTTGGGGAAACTGACATAAAATTGTGAGAAAATGTGGCATGGTGGCAAAGC 565538 Query 97269 CATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328 ||| || || ||| |||||||||| ||| | ||||||||||| || || Sbjct 565539 CATCTTGTCAAAATCAGCTGGGTTCCAAGCACTCATAATAATTCTTCTATCATAAGGATT 565598 Query 97329 TGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTG 97388 ||| | || ||| ||| | |||||| |||||||||| || | |||| |||| | || Sbjct 565599 TGTCTTTAGTTTATGAATGACCTGCTTCAATTGATCAATACCCTGTCCAGCATAGTCGTC 565658 Query 97389 CTTA-AGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAA 97447 | | || |||| |||| || || |||||||||||||||||||||||||| || || | Sbjct 565659 ATCACAGGTCTTG-TATTTAGCACCGAAATGCCTCCATTGGAATCCATAAACGGGCCCTA 565717 Query 97448 GGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTG 97507 || || ||| |||||| ||| || | |||||||| ||| | |||||||| Sbjct 565718 AATCCCCCACTTTTCTATCTGTGAACCCCATCTTATCTAGATATTCACGGGATCCATTAC 565777 Query 97508 CATCCCAAATGTGCACACC 97526 | |||||||| | ||||| Sbjct 565778 CGTCCCAAATCTTAACACC 565796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783928150690