Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq5 226 3e-54
seq10 181 9e-41
seq15 170 2e-37
seq14 120 3e-22
seq12 93.3 4e-14
>seq5
Length=577572
Score = 226 bits (250), Expect = 3e-54
Identities = 459/677 (68%), Gaps = 6/677 (1%)
Strand=Plus/Minus
Query 23264 GCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGG--CGATTGCATCGGACACATGA 23321
|| ||||| ||| |||||||||||||| || ||||| || || | ||| | | |
Sbjct 305868 GCTTCAAACTCGTCACCGTAACAGTCGCTTAGACCGGGAGCGGCTG--TTGGAGAGAACA 305811
Query 23322 GACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGT 23381
| |||| | | | ||| || || |||| |||||||| || ||||| |||||
Sbjct 305810 AAGTCCAAGTCCCATTCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCACAGAGCAG 305751
Query 23382 AGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGT 23441
|||| || | || || | || ||||| ||| ||||||| | | ||| | ||| |
Sbjct 305750 GAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAAT 305691
Query 23442 CCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGC 23501
| || | || |||||||| || || ||||| | ||||| || || ||||| || || |
Sbjct 305690 CAAAGATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTAC 305631
Query 23502 CGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGT 23561
| ||||| ||||| |||||||| || || || | || | | ||| || | | ||||
Sbjct 305630 CACCCTGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGT 305571
Query 23562 TGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGA 23621
| || | ||| | || || | ||||| ||| |||| ||| || | || |
Sbjct 305570 TAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTA 305511
Query 23622 AACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGC 23681
||| || || || | | ||| || |||| || |||| ||||| ||||||||| || |
Sbjct 305510 GACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATAC 305451
Query 23682 CCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCG 23741
||||||| |||||| || | |||||||||||||| || |||||||| | ||| || |
Sbjct 305450 CCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAG 305391
Query 23742 TAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGT 23801
|| | || |||| || || ||| || ||||||||| ||||||| || |
Sbjct 305390 TACCAGCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTAT 305331
Query 23802 ACGTGTCGATGGCGGCATCAATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATC 23860
| || || | || || || |||| |||| ||||| || || | ||||| | ||| ||
Sbjct 305330 ATGTTTCTAGAGCAGCTTCGATGT-CTCTACCGTGGATGCCCAGTGCGACTCTCATAATT 305272
Query 23861 ATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATC 23920
| || ||| || | ||| || |||||| ||| | | | ||| ||||||| ||
Sbjct 305271 AAGTGTTGTGGACGTTCGGCCACTTGGCCGTTGATTCTTAGTAAATAAGAACGTTCCAAA 305212
Query 23921 GTTTTAAATCCAAAATA 23937
||||| || ||||||||
Sbjct 305211 GTTTTGAAACCAAAATA 305195
>seq10
Length=751133
Score = 181 bits (200), Expect = 9e-41
Identities = 475/716 (66%), Gaps = 13/716 (2%)
Strand=Plus/Plus
Query 57591 GCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG 57650
|| ||||| || || ||||||| |||||| | || ||||||||||| | || |||
Sbjct 379963 GCCGAAGCCTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATTCATGACTGG 380022
Query 57651 GATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCC 57707
| | | || ||| |||||| ||||||| || | || |||||||||
Sbjct 380023 AACAACAGAATGAACGAAAACGAGAGATTTTTTATTTCTAGAGTTCTTGCCTTTTTCGCC 380082
Query 57708 GCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTG 57767
|| || || ||||||||||| || || ||||| |||| || || ||||| ||| |
Sbjct 380083 GCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTTCAAATT 380142
Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827
| ||||| | | || || || || ||| | |||||||| | ||||| ||||
Sbjct 380143 CCAGAGGCAAAGAGTTTCTATGGTTTCCAAATCATGATTGAAAATATTCATTCTGAAACT 380202
Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAA 57886
|| || || | |||||||| ||| | |||||| | | | || | | | |||||||
Sbjct 380203 TACTCCTTATTGATCGATACCTACATCAAGGAC-CCTAAGGAAAGTGAATTCTTGTTCAA 380261
Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946
|| || | || || || | |||| ||||||| |||||| | | | |||||| |
Sbjct 380262 TGCCATTCACACTATCCCAGAAATCGGTGAGAAGGCCGAGTGGGCTCTAAGATGGATTCA 380321
Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006
| ||| ||| ||| | || || ||| |||| || || | |||||||| | ||
Sbjct 380322 AGACGCTGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCTTCTATCGAAGGTGTCTT 380381
Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066
||| || || ||| || | || || ||| ||||||| | || ||||||| || |
Sbjct 380382 CTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAGGTATGATGCCAGGTTT 380441
Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126
||| || ||||| ||||| | | ||||| ||| | || || || ||||| ||| |
Sbjct 380442 GACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGACTTTGCATGCTT 380501
Query 58127 AATGTACTCTCACATTGTCAATAAACC-GACGCGGGATCGCATCTTG--GACATTATCAC 58183
| ||| | | || | || ||||| ||| | | | | ||| | ||| ||||
Sbjct 380502 ATTGTTCGCCCATTTGAAGAACAAACCAGACCC---AGCAATTGTTGAAAAAATTGTCAC 380558
Query 58184 CGAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCG 58242
|||||| || | || ||| || || | || || ||| |||| || ||| |||| |
Sbjct 380559 CGAGGCTGTGGAAATTGAACAAAGA-TACTTCTTGGACGCCTTACCAGTTGCCTTGCTAG 380617
Query 58243 GTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTG 58298
|||||||| ||| | ||| | ||| ||||||| ||||| ||||||||||||
Sbjct 380618 GTATGAACGCTGACCTAATGAACCAATACGTTGAGTTCGTTGCTGACAGACTTTTG 380673
>seq15
Length=1201643
Score = 170 bits (188), Expect = 2e-37
Identities = 421/639 (66%), Gaps = 0/639 (0%)
Strand=Plus/Plus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
|| ||| ||| |||||||||| || || ||||| ||||| ||||| || | || ||
Sbjct 235767 TTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGCAGGGAACAAATCCCTTGCACG 235826
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
| || ||||| || | | ||| | | ||| | |||||| || | || ||||||||
Sbjct 235827 GATTTCTTCTTTACCATGGGTTTTTCTAATATCGACAAAGTCGAAGATATCTGCATGCCA 235886
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
|| || | | ||| |||||| ||||| |||||||| || || || || || || |||||
Sbjct 235887 TGGTTCCAAGAAAAGGGCAAAGGCGCCAGGTCTCTTGTTACCTCCTTGGTCCACATAACG 235946
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
|| || |||||| | || | | ||| || | | || || || | ||| ||
Sbjct 235947 AGCAGTATTGTTGAAAACACGGATCATAGGAATCAACCCATTTGAAGTACCGTTGGTACC 236006
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | | |||||| | | || | ||||| || || | ||| | || || | |
Sbjct 236007 GGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATGAAGACCAACACCACCTGCAGT 236066
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || ||||| || |||| ||||| ||| || || || || || || ||| || ||
Sbjct 236067 CTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCAATAGAGTCATCCTT 236126
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| || | | |||||| ||||||||||| | | || ||| | || ||| | ||
Sbjct 236127 CATGGCAATTAGGAAACATGAAGACATTTGGGGATGTGGAGTACCAGCGTTGAATAAGGT 236186
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
||| ||||| || || |||| |||||| | |||||| || | | | | ||
Sbjct 236187 TGGGGAAGCGTGAGTGAAATATCTTAACGACATCAAATTGTAGGTCTTCAGCACAGACTC 236246
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880
||| || ||||| ||||| | || || ||||| | || || || || | || |
Sbjct 236247 AATATCACTACCGTGGATACCCAGCGCCACACGCATAACCAAGTGCTGTGGCCGTTCAGC 236306
Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940
| | ||||| | | | | || ||| ||||| | || || || || ||||||||
Sbjct 236307 CACTTCACCGTTCAGTCTTAGCAAATACGAACGCTCCAAAGTCTTGAACCCAAAATACGT 236366
Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
||| || || || | ||||| ||| ||||| || |||||
Sbjct 236367 ATACTTGAAATCTCTATCGTACACGATGGCTGAGTTCAA 236405
Score = 91.5 bits (100), Expect = 1e-13
Identities = 155/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
||| || |||||| |||| || || || ||||| | || |||||| | || |||| | |
Sbjct 71087 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 71146
Query 31261 CGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319
|| | ||||| || ||| | | |||||||||| | || || ||||| || |
Sbjct 71147 TGACAATGTCAAGTCAAAGATTCAAG-ACAAGGAAGGTATCCCACCTGACCAACAAAGAT 71205
Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379
| || || ||||| || || ||||||||| || || || || || ||||||||||
Sbjct 71206 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAA 71265
Query 31380 AAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||||| ||| | || | || | ||| |||| || ||||
Sbjct 71266 AAGAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGGTA 71307
>seq14
Length=872155
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || || ||||| || |||||||| || ||| | || |||||| | |||
Sbjct 57112 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 57053
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | ||| |||||| ||||| | || || |||||
Sbjct 57052 GACACTATTGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 56993
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || || || || || ||||||| || || || |||||||||
Sbjct 56992 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTATAAC 56933
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| |||||||| ||| | ||| | || || ||| |||| || ||||
Sbjct 56932 ATTCAGAAAGAATCTACTTTGCATTTAGTGCTGAGATTGAGAGGTGGTA 56884
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| || || || || ||| |||| || ||| | |||
Sbjct 56884 ATGCAGATCTTCGTTAAGACGCTGACTGGTAAGACTATAACCCTCGAGGTCGAATCTTCC 56825
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | ||| || |||||||| | || || |||||
Sbjct 56824 GACACTATTGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 56765
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || || || ||||| ||||||| || || | ||| || |||
Sbjct 56764 CAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGTAGAACATTATCCGACTACAAC 56705
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| ||||| ||||| || ||||| | || ||||||| ||||
Sbjct 56704 ATTCAAAAGGAATCTACTCTCCACCTGGTCTTAAGGTTGAGGGGTGGTA 56656
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || |||||| |||| || ||||| || || | || || ||| | ||
Sbjct 57568 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 57509
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | ||||| | ||| |||||| ||||| | || || |||||
Sbjct 57508 GATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 57449
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || || || || || ||||||| || || || |||||||||
Sbjct 57448 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACACTGTCTGATTATAAC 57389
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| |||||||| || | ||| | || || ||| |||| || ||||
Sbjct 57388 ATTCAGAAAGAATCTACCTTGCATTTAGTGCTGAGATTGAGAGGTGGTA 57340
>seq12
Length=1068413
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| |||||| | || || || || || ||| | || |||||| |
Sbjct 493583 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCT 493642
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | | || | ||||| | || ||||||||||| | || || |||
Sbjct 493643 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 493702
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| || || |||||||| | || || || ||
Sbjct 493703 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTAC 493762
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||||||||| ||| | || |||| | ||| |||| || |||
Sbjct 493763 AACATCCAAAAAGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 493813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766305274640
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