Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq15 149 1e-30
seq10 131 3e-25
seq5 102 2e-16
>seq15
Length=1201643
Score = 149 bits (164), Expect = 1e-30
Identities = 210/296 (71%), Gaps = 18/296 (6%)
Strand=Plus/Minus
Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392
|| ||| ||| |||||| || || |||| | | || | | ||||| |||||| |
Sbjct 565787 ATTTGGGACGGTAATGGATCCCGTGAATATCTAGATAAGATGGGGTTCACAGATAGAAAA 565728
Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452
| ||| ||||| || ||||| || |||||||||||| | ||||| |||||| |||| |
Sbjct 565727 GTGGGGGATTTAGGGCCCGTTTATGGATTCCAATGGAGGCATTTCGGTGCTAAATACAAG 565668
Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATT------GGCCA---ATATA 35503
|||||| | ||| ||| ||||| |||||||||||||||| || || ||| |
Sbjct 565667 ACCTGTGATGACGACTATGCTGGACAGGGTATTGATCAATTGAAGCAGGTCATTCATAAA 565608
Query 35504 CTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCT 35563
|||||||| |||||| |||||||||| || ||||||| || ||||| ||
Sbjct 565607 CTAAAGAC---------AAATCCTTATGATAGAAGAATTATTATGAGTGCTTGGAACCCA 565557
Query 35564 ATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
||| || || |||||| | || ||||||||||| | |||||||||||
Sbjct 565556 GCTGATTTTGACAAGATGGCTTTGCCACCATGCCACATTTTCTCACAATTTTATGT 565501
>seq10
Length=751133
Score = 131 bits (144), Expect = 3e-25
Identities = 336/506 (66%), Gaps = 18/506 (4%)
Strand=Plus/Plus
Query 101859 AGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATTTG---GCGGAACTAA 101915
|||||| |||||||| | | ||||| ||| | | ||| ||| | ||| |
Sbjct 380291 AGAAGGCCGAGTGGGCTCTAAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGAC 380350
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
| || ||||||||| | | ||||| ||||||| ||| | ||||| ||||||||||
Sbjct 380351 TAGTCGCCTTTGCTTCTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCT 380410
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035
|| | ||||| || ||||| |||| ||| | |||| ||| || || || |||| || |
Sbjct 380411 GGTTGAAGAAGAGAGGTATGATGCCAGGTTTGACCTTCTCTAACGAATTGATTTGCAGAG 380470
Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095
|||||||| | || ||||||||||||| | |||| | |||| || |
Sbjct 380471 ACGAAGGTTTGCACACCGACTTTGCATGCTTATTGTTCGCCCA----TTTGAAGA---AC 380523
Query 102096 CATCAAGAGAAAG-GATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151
| | ||| || ||| ||| |||||||||| || || || |||||||||| |
Sbjct 380524 AAACCAGACCCAGCAATTGTTGAAAAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGA 380583
Query 102152 TTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211
| || | || | || ||| || | || |||||| | | |||| |||
Sbjct 380584 TACTTCTTGGACGCCTTACCAGTTGCCTTGCTAGGTATGAACGCTGACCTAATGAACCAA 380643
Query 102212 TACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATA 102269
||| |||| || || || || | ||| ||||||| | || || ||||| |||| |
Sbjct 380644 TACGTTGAGTTCGTTGCTGACAGACTTTTGGTTGCCTTCGGTAACAAGAAA--TACTACA 380701
Query 102270 ATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTT 102329
| || ||||||||| || ||||| || || || | | |||||||||||| |
Sbjct 380702 AGGTCGAAAACCCCTTCGACTTTATGGAAAACATCTCTTTGGCTGGTAAGACCAACTTCT 380761
Query 102330 TTGAAAAGAGAGTCGCCGAGTATCAA 102355
||||||||||||| | || || |||
Sbjct 380762 TTGAAAAGAGAGTTTCTGATTACCAA 380787
>seq5
Length=577572
Score = 102 bits (112), Expect = 2e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 94189 GAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTCAGTGCAC 94248
|||||||| || || || |||||||| |||| | | ||||| ||||||||| |||
Sbjct 306102 GAAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCAT 306043
Query 94249 AAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGATGGTATCC 94308
|| ||||| |||||||| | || | |||| ||||||||||||||| ||| | |||
Sbjct 306042 AAGTTTGATGACTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCT 305983
Query 94309 TTAAAGCACACATAAGGTGTTCCAGTTTC 94337
||| | |||| ||||||| || |||||
Sbjct 305982 TTATAAACCACAAAAGGTGTACCCGTTTC 305954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583784456235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |