Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq15 185 8e-42
seq5 172 5e-38
seq10 140 3e-28
>seq15
Length=1201643
Score = 185 bits (204), Expect = 8e-42
Identities = 975/1542 (63%), Gaps = 41/1542 (3%)
Strand=Plus/Plus
Query 37120 AATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTG 37179
|||| | |||||| || || || || || ||||| || || | | | || || ||
Sbjct 234859 AATAAATATGGATTAACGACTTGGAATTCACCAGACAAGACACGACGAGAGTACATGTTT 234918
Query 37180 CTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGC 37239
||| |||||||| | || |||| | | |||||||| || || ||||| |||
Sbjct 234919 GAAGTCACTGGTTCAAAACATTCGTTATACCCAAGAATTTGAGAAGTCGAGGCAGTTGGC 234978
Query 37240 ATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGT-ATTAATTCTCTTTTTTAGTTC 37298
||||| || ||| | ||||| ||||||||| | | || || || || || |
Sbjct 234979 ATTGGCGCCATTGTTAAAGAGTTTCTTAATCCATGTTTGACTATGTCCTTTCTTAAGATT 235038
Query 37299 ATTCCAATCCCATAAATCTGTTGGGTT--CTTTAACCACATATCATATTGTAGAATACCT 37356
| ||||||||| | | | ||| || | || |||||| ||| |||||||||||||
Sbjct 235039 -TCCCAATCCCACATACCAAATGGCTTAGCGTT--CCACATGTCAAATTGTAGAATACCC 235095
Query 37357 TTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAA 37416
||| ||||||||| | | | || ||| || | | | || | ||| ||
Sbjct 235096 TTAGAGGCTGGAGAACCTTCGAAAGTGGAATACTTACCTTCCTTCTGTGCCAATTCACAG 235155
Query 37417 CTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCT 37476
| ||| || | |||| ||| || ||||||||||| ||| | || || ||| |||
Sbjct 235156 GAGGCTTCAAGAGTAGCATGATAGATGGTTTCGAAAATCTGTTTGTTCAAAGTTTGAGCT 235215
Query 37477 TCTTCGCTATCGAATGCATAGCC-CAATAATATAAACACATCAGCCAAACCCTGAACACC 37535
||||| | || || | ||| | ||| | ||| | ||| |||| ||| ||||||||
Sbjct 235216 TCTTC-CGATTCAAAGGGTAGACGCAACATCATATAGGTATCGGCCAGACCTTGAACACC 235274
Query 37536 GATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATT 37595
| | || |||||||| ||| |||| || | | ||| ||||||||||||||
Sbjct 235275 CAAGGCAATAGGTCTATGCTTCATATTTGAATTTCTGGCTTCAGGAACTGGATAATAATT 235334
Query 37596 GATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTAT-TCTCAACTTGT 37654
||| || | | | || | || | | || ||| | |||| | | |||| |
Sbjct 235335 ACGATCGATGACTCTGTTCAAGTTATGGGTAATTACTTTAGCAATTTCATGTAAACTC-T 235393
Query 37655 CGAACATAAATACGTT-ATTATTAACAAATTTA-----CTCAACGAA------------- 37695
|||| || | || | | | ||| || || | ||| || ||
Sbjct 235394 CGAAATTATA-ACTTGCAGTTTTACCATCTTCAGACATCTCGACAAATGCTGGGAGGGCA 235452
Query 37696 ATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTA 37755
||||| |||||||||| || || ||||||| | | | | | || || |
Sbjct 235453 ATAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAGGAATACTCGACGATTTCACAA 235512
Query 37756 CAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAA 37815
|| | ||| ||| |||| || ||||| || ||| || | ||| ||||||| ||
Sbjct 235513 CACAAATTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTATTACATGAG 235572
Query 37816 TCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCAT 37875
|| || || | || | || || ||| |||| |||| || | | ||| | | ||||
Sbjct 235573 TCCTTGTAAACCATGAAAGGTGTACCTGTTTCTGTTTGTGCTTGTAAAATTGCATACCAT 235632
Query 37876 AAACTTCTTGCTTTAACGATCGCTTTA--AtttttttCTTTGTTTCGTATTCTATATATA 37933
|| || || |||| | | |||| | ||| | |||||| ||||||
Sbjct 235633 AACTTTTGGGCCTTAATGGT---TTTACCACGACCTTCCCT--TTCGTAACGGGTATATA 235687
Query 37934 ATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTA 37993
| | ||| |||| ||||| ||||| ||| ||||| | | ||| | | ||
Sbjct 235688 GCTCTTCAAATTCATCACCCCAGACATCATCTAAACCTGGGGCAGCACTGGGAGAAAATA 235747
Query 37994 GAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAG 38053
|| ||| |||| | || || |||| |||||| | ||||| | ||| | ||||
Sbjct 235748 AAGTCCAGGGCCCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGCAG 235807
Query 38054 TAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAAT 38113
|| ||||| | | | |||||| || || | ||||| | | ||| |
Sbjct 235808 GGAACAAATCCCTTGCACGGATTTCTTCTTTACCATGGGTTTTTCTAATATCGACAAAGT 235867
Query 38114 CGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCAC 38173
|||| ||||| || ||||||||||| | ||| | | || || ||||| || | ||
Sbjct 235868 CGAAGATATCTGCATGCCATGGTTCCAAGAAAAGGGCAAAGGCGCCAGGTCTCTTGTTAC 235927
Query 38174 CTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCAT 38233
|||| || | | ||| | | | || || || | | | | |||||| | | ||||
Sbjct 235928 CTCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGGATCATAGGAATCAACCCAT 235987
Query 38234 TAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACA 38293
| || | ||||| |||||| ||||||| ||| | | || || || | || |
Sbjct 235988 TTGAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATGAA 236047
Query 38294 ATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATAC 38353
|| | ||||||||| || || || | ||| |||| ||| || |||||| | ||||
Sbjct 236048 GACCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATAC 236107
Query 38354 CTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAG 38413
|||| ||| ||||||||| || | | || ||||| ||||||||| || |||||
Sbjct 236108 CTTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGTGGAG 236167
Query 38414 TTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTAT 38473
| || ||||| ||||| || || || || || |||| || || ||||| |||| |
Sbjct 236168 TACCAGCGTTGAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTAACGACATCAAATTGT 236227
Query 38474 ATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCA 38533
| || | | ||| || ||||||| ||||| ||||| || | || | ||| | ||
Sbjct 236228 AGGTCTTCAGCACAGACTCAATATCACTACCGTGGATACCCAGCGCCACACGCATAACCA 236287
Query 38534 TATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATG 38593
|| ||||| | ||| | || | ||| || | || | |||||| || || |
Sbjct 236288 AGTGCTGTGGCCGTTCAGCCACTTCACCGTTCAGTCTTAGCAAATACGAACGCTCCAAAG 236347
Query 38594 TTTTTATTCCAAAATAACTATA--TGAATAATCTCTATCGTA 38633
| || | |||||||| |||| |||| ||||||||||||
Sbjct 236348 TCTTGAACCCAAAATACGTATACTTGAA--ATCTCTATCGTA 236387
>seq5
Length=577572
Score = 172 bits (190), Expect = 5e-38
Identities = 413/622 (66%), Gaps = 2/622 (0%)
Strand=Plus/Minus
Query 38013 TTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCT 38072
||| || || | ||| || | |||||| | ||| | |||| ||| |||||| | | |
Sbjct 305791 TTCGACACGCTTCATGAAAAGATCAGGAATCCACAGAGCAGGAAACAAATCTCTTGCACG 305732
Query 38073 ATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCA 38132
| |||||| || || |||||||| | | |||||| || |||||||| |||||
Sbjct 305731 AATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAGATATCAGCATGCCA 305672
Query 38133 TGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCT 38192
|||||| | || | | | || || |||||||| | ||| ||||| | | ||| |
Sbjct 305671 TGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCCTGGTCGACATAACG 305612
Query 38193 AACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACC 38252
| || |||||| | | | | ||| || | || || ||||| | |||||| ||||
Sbjct 305611 GGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAAGTACCGTTTGTACC 305552
Query 38253 GGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATG 38312
| || |||| ||| | | || || ||| || | || || ||||| |||
Sbjct 305551 AGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGT 305492
Query 38313 TTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTT 38372
||| || || ||||| |||| ||| || || || | ||||| || ||| ||| |||||
Sbjct 305491 TTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTT 305432
Query 38373 TATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGT 38432
|| | | | |||||| ||||||||||| |||||| || || ||||| || ||
Sbjct 305431 CATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGT 305372
Query 38433 AGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATC 38492
||||| ||||| | || ||||| |||| | ||||||||||||| || | ||
Sbjct 305371 TGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATATGTTTCTAGAGCAGCTTC 305312
Query 38493 TATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTAT 38552
|| || | ||||| || || || | || ||||| | | |||||||| | |||
Sbjct 305311 GATGTCTCTACCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTGTGGACGTTCGGC 305252
Query 38553 TATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACT 38612
| || || | | |||| ||| || ||| || ||||| | |||||||||||
Sbjct 305251 CACTTGGCCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTGAAACCAAAATAACT 305192
Query 38613 ATA-TGAATAATCTCTATCGTA 38633
|| || | ||||||| || ||
Sbjct 305191 GTACTGGA-AATCTCTGTCATA 305171
Score = 165 bits (182), Expect = 8e-36
Identities = 534/817 (65%), Gaps = 19/817 (2%)
Strand=Plus/Minus
Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873
||||| | || ||||||| || ||||| || || || | ||| |||| ||||||
Sbjct 307008 GATGCGGCTTGGGTTCTCAAGTAGTACATACCGGTCTTCAATCCCTTCTTCCACCCGTAA 306949
Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGA 36933
||||||||||| || || || | || || | | ||| ||| || |||
Sbjct 306948 AAATGCATACTTGTTAGCTTACCCATAGTTGGGGCACGCAAGAATAAATTCAAGGAATGA 306889
Query 36934 CTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATC 36993
||| || ||| | || | |||||||||||| | | ||| ||||| || ||
Sbjct 306888 GATTGGTCGATATAAACAGAACGGTCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATT 306829
Query 36994 TCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATA 37050
||||| || ||||| |||| | || | | | ||| | || | ||| ||||||
Sbjct 306828 TCCCAGACAGTTTTGTATAAGTCCTTCAATTCTTGTGGAACATTTGGTAAACCTTGAATG 306769
Query 37051 GAACCATTATGTAACA-CAATTGTATTCTTT-ATGTCATTATTCCACATATTTCTACTTA 37108
|| || || ||| | ||| | | | ||| || | | || ||| ||| | | |
Sbjct 306768 GAGCCGTTCTGTGTAATCAAAT--ACTGTTTCATACCCTCATCCCAAATACCTAAATCAA 306711
Query 37109 TTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTG 37168
| || | || || || || || ||||| || || || || ||||| || | | |
Sbjct 306710 CCAAATCGCGCAGTAAGTAAGGGTTCACAACTTGGAATTCACCGGATAAGACACGACGGG 306651
Query 37169 TATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAG 37228
|| || ||| ||| |||||||| | ||||||| || |||||||| ||||| |
Sbjct 306650 AGTACATGTTGGAGGTAACTGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGG 306591
Query 37229 ATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCAATCCATGTGTATTAATTCT 37286
|||| |||||||||||||| || | ||| ||||| | |||||| | | | | |
Sbjct 306590 ATGCGGTAGGCATTGGTGCCATGGTCAAAG--AGTTTCTAATACCATGTTTCATGA-TAT 306534
Query 37287 CTTTTTT---AGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTA-ACCACATATCAT 37342
|||| | ||| | ||||||||| | | || ||||| || | |||||||||
Sbjct 306533 CTTTCCTCAAAGT--GTCCCAATCCCA-CATGCCGTAGGGTTTTTGATCCCACATATCGA 306477
Query 37343 ATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTT 37402
| || || ||||||| | ||||||||| | | | || || || || |||| |||
Sbjct 306476 ACTGAAGTATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTT 306417
Query 37403 TAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATAT 37462
||||||||| ||| || ||| | | ||||| ||| |||||||| || ||||| ||||
Sbjct 306416 GAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATTGTTTCAAATATTTGGATAT 306357
Query 37463 TTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCA 37522
||| || || ||||| ||| || | | | | || ||||| ||||| |
Sbjct 306356 TTAGTAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACATAAAAGTGTCAGCTA 306297
Query 37523 AACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCA 37582
|||| |||||||| | | || ||||||||| || |||| ||||| || |||| |
Sbjct 306296 AACCTTGAACACCCAAGGCAATTGGTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAA 306237
Query 37583 CTGGATAATAATTGATATCTATTATTTTATTTAGATT 37619
| || || ||||| ||| || | | | |||| |||
Sbjct 306236 CAGGGTAGTAATTACGATCAATAACTCTGTTTAAATT 306200
>seq10
Length=751133
Score = 140 bits (154), Expect = 3e-28
Identities = 395/601 (66%), Gaps = 22/601 (4%)
Strand=Plus/Minus
Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680
|||| ||| || ||||| || || |||||||||||||| | || | ||| |||||
Sbjct 380507 AACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAG 380448
Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740
|| || || || ||||||| |||| || || | ||| || || | || || |||||
Sbjct 380447 AAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCG 380388
Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTG 11800
|| ||||| | || || | || ||||| || |||| |||||| ||| | | ||
Sbjct 380387 GAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCA 380328
Query 11801 ----CTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTG 11852
|| || |||||| || ||||| || || |||| || ||| | || |
Sbjct 380327 GCGTCTTGA-ATCCATCTTAGAGCCCACTCGGCCTTCTC----ACCGATTTCTGGGATAG 380273
Query 11853 TTTCTATAGCGTTAAATAAATGCATTT--TTTCTATATTATCTCTTACATATGTATCTAT 11910
| | || || || || || | ||| |||| || || | | || ||||| ||
Sbjct 380272 TGTGAATGGCATTGAACAA--GAATTCACTTTCCTTAGGGTCCTTGATGTAGGTATCGAT 380215
Query 11911 TAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACA 11970
||||| || |||| |||||||||||||| || ||||| || ||||||||||
Sbjct 380214 CAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACT 380155
Query 11971 TCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAAT 12030
|||||||| | || || || | || |||| | || || ||||| |||||
Sbjct 380154 CTTTGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 380095
Query 12031 ACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGT 12090
||| ||| || || ||||| || || | ||||| || | |||| ||| ||
Sbjct 380094 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGT-TTTCGT 380036
Query 12091 TAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAA 12146
| || || | ||| |||| | ||| || || ||||| | ||||||| ||||||| |
Sbjct 380035 TCATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGA 379976
Query 12147 AACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAA 12206
|| || | | | ||||| || ||| || ||||| ||||| |||||||||| ||
Sbjct 379975 AAGAGGCTTCGGCACGCTTATAAGCTTGCCAAATTTCATGGTACTTGATAGGGAAAAGAA 379916
Query 12207 C 12207
|
Sbjct 379915 C 379915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524700438480
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