Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq10 125 7e-24
>seq10
Length=751133
Score = 125 bits (138), Expect = 7e-24
Identities = 539/841 (64%), Gaps = 17/841 (2%)
Strand=Plus/Minus
Query 13563 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13622
|| || ||||| || ||||| || ||| |||||| |||||||||||||| || |||
Sbjct 380807 TTGGACATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTA 380748
Query 13623 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATC 13681
|| ||| || || ||||||||||| || || || ||| | ||| | | ||| |
Sbjct 380747 CCAGCCAAAGAGATGTTTTCCATAAAGTCGAAGGGGTTT-TCGACCTTGTAGTATTTCTT 380689
Query 13682 ACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13741
||| | | | | | ||| ||||||| ||||||| ||||| ||||| ||
Sbjct 380688 GTTACCGAAGGCAACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 380629
Query 13742 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATT--CTTT-TTCTAT 13798
| |||||||||| | || || || | || || | |||| ||| ||
Sbjct 380628 AGCGTTCATACCTAGCAAGGCAACTGG---TAAGGCGTCCAAGAAGTATCTTTGTTCAAT 380572
Query 13799 AGACACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATG 13858
||||||||| | | ||| || || ||| | || | || | |||
Sbjct 380571 TTCCACAGCCTCGGTGACAATTTTTTCAACAATTGCTGGGTCTGGTTTGTTCTTCAAATG 380512
Query 13859 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 13918
|| | ||| || ||||| || || | || || ||||| | ||| | ||||||
Sbjct 380511 GGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTT 380452
Query 13919 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGA 13978
|| || || || |||||||||| |||| || || ||||| || || | || || ||
Sbjct 380451 AGAGAAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGA 380392
Query 13979 CCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGC 14038
||||| ||||| | || || | | |||||| || | || || ||| |||||| | ||
Sbjct 380391 ACCGGAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACAAGGC 380332
Query 14039 TTTTTTGT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 14097
| || | || |||||| || |||||| || | || | || || |
Sbjct 380331 GTCAGCGTCTTGA-ATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCTGGGATAG 380273
Query 14098 TTTCAATAGCATTAAATAAATATTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT 14155
| | ||| ||||| || || |||| | || |||| | ||||| |||| ||||| ||
Sbjct 380272 TGTGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGA--TGTAGGTATCGAT 380215
Query 14156 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCA 14215
| |||| || ||||||| || || ||||| || || || |||||||| || |
Sbjct 380214 CAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACT 380155
Query 14216 TCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTAT 14275
| || || | ||| ||||| | | | || |||| |||| ||||||||||| ||
Sbjct 380154 CTTTGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 380095
Query 14276 ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTT 14335
||| ||| ||| || ||||| || | | | |||||| || ||| | | |||
Sbjct 380094 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGTT 380035
Query 14336 GAGT---TTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392
| | || ||||| || | ||||||||| | ||| | ||| ||| | ||||| ||
Sbjct 380034 CATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAA 379975
Query 14393 A 14393
|
Sbjct 379974 A 379974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727898057800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |