Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq10 156 4e-33 >seq10 Length=751133 Score = 156 bits (172), Expect = 4e-33 Identities = 546/842 (65%), Gaps = 19/842 (2%) Strand=Plus/Minus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 || || ||||| || ||||| || ||| |||||| |||||||| ||||| || ||| Sbjct 380807 TTGGACATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTA 380748 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469 || ||| || || ||||||||||| ||||| || ||| | ||| | | ||| | Sbjct 380747 CCAGCCAAAGAGATGTTTTCCATAAAGTCGAAGGGGTTT-TCGACCTTGTAGTATTTCTT 380689 Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529 ||| | | | || | ||| ||||||| ||||||| ||||| ||||| || Sbjct 380688 GTTACCGAAGGCAACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 380629 Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT---TCTTT-TTCTA 13585 | |||||||||| | || || | | || || | ||||| ||| | Sbjct 380628 AGCGTTCATACCTAGCAAGGCAACTGGTA----AGGCGTCCAAGAAGTATCTTTGTTCAA 380573 Query 13586 TAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGAT 13645 | |||||||||| | | ||| | | || ||| | || | || | || Sbjct 380572 TTTCCACAGCCTCGGTGACAATTTTTTCAACAATTGCTGGGTCTGGTTTGTTCTTCAAAT 380513 Query 13646 GTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGT 13705 | || | ||| || ||||| || || | || || ||||| | ||| | ||||| Sbjct 380512 GGGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGT 380453 Query 13706 TTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATG 13765 | || || || || |||||||||| |||| || || ||||| || || | ||||| | Sbjct 380452 TAGAGAAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGG 380393 Query 13766 ATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATG 13825 | ||||| ||||| | || || | | |||||| || | ||||| ||| |||||| | | Sbjct 380392 AACCGGAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACAAGG 380333 Query 13826 CTTTTTTGT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATT 13884 | | || |||| |||||| || |||||| || | || | || || Sbjct 380332 CGTCAGCGTCTTGA-ATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCTGGGATA 380274 Query 13885 GTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAA 13942 || | || |||||||| || ||| | || |||| | ||||| |||| ||||| | Sbjct 380273 GTGTGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGA--TGTAGGTATCGA 380216 Query 13943 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAAC 14002 | | |||| || ||||||| || || ||||| || || || |||||||| |||| Sbjct 380215 TCAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAAC 380156 Query 14003 ATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAA 14062 | || |||| ||| || || | | | || |||| |||||||||||||||||| Sbjct 380155 TCTTTGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAA 380096 Query 14063 TACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGT 14122 |||| ||| ||| || ||||| || | | | |||||| || ||| | | || Sbjct 380095 TACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGT 380036 Query 14123 TGAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAA 14179 | | | || ||||| || | ||||||||| | ||| | ||| ||| | ||||| | Sbjct 380035 TCATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGA 379976 Query 14180 AA 14181 || Sbjct 379975 AA 379974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588698299880