Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq15 102 1e-16 >seq15 Length=1201643 Score = 102 bits (112), Expect = 1e-16 Identities = 172/244 (70%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 70046 GGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCAC 70105 || ||||| || ||| ||| ||| ||| | ||||| || || |||||||| |||||||| Sbjct 565745 GGGTTCACAGATAGAAAAGTGGGGGATTTAGGGCCCGTTTATGGATTCCAATGGAGGCAT 565686 Query 70106 TCGGGCACCAAGTATGTAGAC-TGCGA-GACAGACTATTCGGGTCAGGGTGTTGATCAAT 70163 | || | || || |||| || || ||| |||||| | || |||||| ||||||||| Sbjct 565685 TTCGGTGCTAAATACA-AGACCTGTGATGAC-GACTATGCTGGACAGGGTATTGATCAAT 565628 Query 70164 TGCAGACAATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCT 70223 || || ||||| | | || ||||| ||||| ||||| || || | ||| | Sbjct 565627 TGAAGCAGGTCATTCATAAACTAAAGACAAATCCTTATGATAGAAGAATTATTATGAGTG 565568 Query 70224 CATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGT 70283 | ||||| || || ||||| || | ||||| | ||||| || ||| ||| | || | Sbjct 565567 CTTGGAACCCAGCTGATTTTGACAAGATGGCTTTGCCACCATGCCACATTTTCTCACAAT 565508 Query 70284 TTTA 70287 |||| Sbjct 565507 TTTA 565504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059042524920