Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq10 170 2e-37
>seq10
Length=751133
Score = 170 bits (188), Expect = 2e-37
Identities = 555/852 (65%), Gaps = 29/852 (3%)
Strand=Plus/Minus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|| ||||||||| ||||| || || |||||| |||||||| ||||| || ||
Sbjct 380807 TTGGACATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTA 380748
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTT 12960
|| | || || || ||||||||||| ||||| || |||| ||| | |||||||| ||
Sbjct 380747 CCAGCCAAAGAGATGTTTTCCATAAAGTCGAAGGGGTTTT-CGACCTTGTAGTATTTCTT 380689
Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020
|| || | | || | |||||||||||| ||||| | ||| || ||||||| ||
Sbjct 380688 GTTACCGAAGGCAACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 380629
Query 13021 ACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGt---ttttttCTAT 13077
| |||||| |||| || || || | || || || |||| ||| ||| ||
Sbjct 380628 AGCGTTCATACCTAGCAAGGCAACTGGTAAGGCGTCC---AAGAAGTATCTTTGTTCAAT 380572
Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----A 13133
|| || || ||| | || || | | | | | | || | | |||| | |
Sbjct 380571 TTCCACAGCCTCGGTGACAATTTTT-TCAACAATTGCTGG---GTCTGGTTTGTTCTTCA 380516
Query 13134 GATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCT 13193
||| |||| | |||||||| || |||||| ||||| ||||| | || | |
Sbjct 380515 AATGGGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATT 380456
Query 13194 CGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAA 13253
|||| || || || | ||| ||||| | |||| || || | ||| || || | || |
Sbjct 380455 CGTTAGAGAAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGA 380396
Query 13254 ACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACG 13313
| ||||| || || || | ||||| | | ||||| || | | ||||||||| ||
Sbjct 380395 AGGAACCGGAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACA 380336
Query 13314 TACTATTTTTACTCTCTA-TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372
| | ||| | |||| || ||||| | || || | || | |||
Sbjct 380335 -AGGCGTCAGCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTCTC----ACCGATTTC 380281
Query 13373 ----ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGT 13428
||| | | || || || || || | | |||||||| ||| || || ||
Sbjct 380280 TGGGATAGTGTGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGATGTAGGT 380221
Query 13429 ATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA 13488
||| ||||||||| || |||| |||||||||||||| ||| ||||||||||||||
Sbjct 380220 ATCGATCAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATA 380161
Query 13489 AAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTT 13548
|||| | ||||||| | |||||||||| | | || |||| | |||||||| ||
Sbjct 380160 GAAACTCTTTGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATT 380101
Query 13549 AACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTT 13608
||| || |||||| ||| || ||||| ||||| | |||||| | | |||||
Sbjct 380100 AACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTT 380041
Query 13609 TTCTGACA---ACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGT 13665
||| || || ||| || ||| ||| || || ||||| | || ||| ||||
Sbjct 380040 TTCGTTCATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGT 379981
Query 13666 CCAAAAAGAAGC 13677
||| ||||| ||
Sbjct 379980 CCAGAAAGAGGC 379969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982310705834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |