Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq15 132 6e-26
seq2 102 1e-16
>seq15
Length=1201643
Score = 132 bits (146), Expect = 6e-26
Identities = 301/451 (67%), Gaps = 35/451 (8%)
Strand=Plus/Plus
Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869
||||||||| | |||| || || || ||||| ||| ||||| || || ||||||||
Sbjct 565278 TTGTTCTTTCAAGGCTTCAATGTGGTCCTTATAAACATGTGCATCCCCCAGAGTATGAAT 565337
Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929
||| |||||||| | ||| || ||| ||| |||||| | || || | ||||| ||
Sbjct 565338 AAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAGAGCATATGA 565397
Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACA---TTGA 6984
|| | |||||| ||||| || || ||||| || || | ||| |||||| |||
Sbjct 565398 TGCAATATTAAATGGTACGCCCAACCCCATGTCACAAGAACGTTGGTATAACAAACATGA 565457
Query 6985 CAAG------ATAAAATAT-TGTCT---------------ATAGCATAAAATTGACACAA 7022
| | || | || |||| | |||||||||| | ||
Sbjct 565458 AAGGTGGGGCTTACCAGATCCGTCTCCTTCTTTGGGGAAACTGACATAAAATTGTGAGAA 565517
Query 7023 TACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAA 7082
| || ||||| || ||| | || || | ||||| ||| ||||||||| |||| |
Sbjct 565518 AATGTGGCATGGTGGCAAAGCCATCTTGTCAAAATCAGCTGGGTTCCAAGCACTCATAAT 565577
Query 7083 AATACGTCTATCATTTGGATTTGTTTTTAATTT-TGTTATAATTATTTG---TAATTGAT 7138
||| | |||||||| |||||||| |||| ||| || ||| | || |||||||
Sbjct 565578 AATTCTTCTATCATAAGGATTTGTCTTTAGTTTATG----AATGACCTGCTTCAATTGAT 565633
Query 7139 CTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCC 7198
| |||||||| || |||| | || ||| | | || ||||| || ||||| ||||
Sbjct 565634 CAATACCCTGTCCAGCATAGTCGTCATCACAGGTCTTGTATTTAGCACCGAAATGCCTCC 565693
Query 7199 ATTGAAACCCATAAATAGGACCTAAATCACC 7229
|||| || ||||||| || |||||||| ||
Sbjct 565694 ATTGGAATCCATAAACGGGCCCTAAATCCCC 565724
Score = 96.9 bits (106), Expect = 4e-15
Identities = 127/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 19328 GTTAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTT 19387
|||||| || ||||| || | || | ||| |||| ||||| || ||||| ||| |
Sbjct 707374 GTTAAAGTTCGTGTAAGAACTACGAAGGTTCCTCAAATTGGTGACAAATTTGCCTCTCGT 707315
Query 19388 ACTGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAA 19447
|| |||||| || || |||||| | |||||| |||||||||||| ||||| |
Sbjct 707314 CATGGTCAAAAGGGTACCATTGGTATCACATATCGTAGAGAAGATATGCCATTTACAGCA 707255
Query 19448 GATGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
|| ||||| || |||||| | || || || || || ||| ||||| ||| |||||
Sbjct 707254 GAAGGTATTGTTCCGGATTTAATCATCAATCCTCACGCTATTCCATCTCGTATGAC 707199
>seq2
Length=731301
Score = 102 bits (112), Expect = 1e-16
Identities = 251/377 (67%), Gaps = 18/377 (5%)
Strand=Plus/Minus
Query 164605 AAAATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTT 164664
||||| || || ||||||||| | |||| || || || ||| ||||| | ||| ||
Sbjct 399948 AAAATCGTCAACGGTCCTGAAATTTTGAGTAAGTACGTTGGTTCTTCAGAGGAGAATATT 399889
Query 164665 AGAAAGTTGTTTCAGGAGGCTGAAGAAGAACAAAAGAAAGC--AGGTTTAGCTAGTAAA- 164721
| || || ||| |||| || |||| |||| | | || ||| | || | |
Sbjct 399888 CGTAATTTATTTAAGGATGCCGAAGCAGAATATCGG---GCCAAGGGTGAGGAATCATCC 399832
Query 164722 TTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAA---------ACGTGGT 164772
|||||| | ||| |||| ||||| | ||| || ||| ||| | | | |||
Sbjct 399831 TTACATATCATTATTTTCGATGAACTGGATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGT 399772
Query 164773 GATAATATTATTCATGATG-CAGTG--GTTAATCAGTTGCTTTCTAAAATAGATGGTGTA 164829
||| || | | || || || |||||||| || | |||| || ||||||||
Sbjct 399771 GATGGTACCGGTGTAGGTGACAATGTAGTTAATCAATTATTAGCTAAGATGGATGGTGTT 399712
Query 164830 GAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGAT 164889
|| || |||||||| || || | |||||||||||||| |||||||| ||| |
Sbjct 399711 GATCAATTGAATAATATATTGGTTATTGGTATGACCAACCGTAAGGATTTAATAGATAGT 399652
Query 164890 GCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAA 164949
||| | ||||| || ||| |||| ||| | || | ||||| ||||| ||| || ||
Sbjct 399651 GCTCTTTTACGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTCATTTACCGGACGAAAAA 399592
Query 164950 GGACGCCTTCAAATTTT 164966
||| | || ||||||||
Sbjct 399591 GGAAGGCTCCAAATTTT 399575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871873377200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |