Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq14 116 6e-22
seq2 113 7e-21
>seq14
Length=872155
Score = 116 bits (128), Expect = 6e-22
Identities = 188/268 (70%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||||||| | | ||| ||| |||||||||||||||| ||||| |||||||||||
Sbjct 571876 GCTAAGCGTCATAGAAAGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCTAT 571818
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 571817 TAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 571758
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| ||||| |||| | | |||| ||| || || | || || ||
Sbjct 571757 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 571698
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || || || ||||| | |||||
Sbjct 571697 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTACGCTTTGAAGAGACAAGG 571638
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | |||||||| || |||||
Sbjct 571637 TAGAACCTTATATGGTTTCGGTGGTTAA 571610
>seq2
Length=731301
Score = 113 bits (124), Expect = 7e-21
Identities = 188/269 (70%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 262461 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 262403
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||| | | ||||| ||||||||| ||||||| ||| |||| ||||| |
Sbjct 262402 TAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 262343
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| ||||| |||| | | |||| ||| || || | || || ||
Sbjct 262342 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTGA 262283
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || ||||| ||||| | |||||
Sbjct 262282 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 262223
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | |||||||| || ||||||
Sbjct 262222 TAGAACCTTATATGGTTTCGGTGGTTAAT 262194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075184456781
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |