Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq14 140 3e-28
seq15 105 6e-18
seq12 102 8e-17
>seq14
Length=872155
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||||| ||||| ||||||| ||| | || ||| | || | ||||| |
Sbjct 57112 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 57053
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | ||||| ||| ||| ||||||||||| || ||||| || |||
Sbjct 57052 GACACTATTGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 56993
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| ||| | |||| | ||| || ||||| ||||||| ||||| | || ||||||
Sbjct 56992 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTATAAC 56933
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| |||||||||||| | ||| | || |||||| | ||||| ||
Sbjct 56932 ATTCAGAAAGAATCTACTTTGCATTTAGTGCTGAGATTGAGAGGTGG 56886
Score = 120 bits (132), Expect = 3e-22
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||||| || || || || || ||| | || || | ||| | |||||
Sbjct 57568 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 57509
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| ||||| || | ||||| ||| ||| ||||||||||| || ||||| || |||
Sbjct 57508 GATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 57449
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTATA 26946
|| || | |||| | ||| || ||||| ||||||| ||||| || ||| | | ||||
Sbjct 57448 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACACTGTCTG--ATTATA 57391
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||| ||||||||||| | ||| | || |||||| | ||||| ||
Sbjct 57390 ACATTCAGAAAGAATCTACCTTGCATTTAGTGCTGAGATTGAGAGGTGG 57342
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || || || | ||||| || | || ||| |||| | ||||| |
Sbjct 56884 ATGCAGATCTTCGTTAAGACGCTGACTGGTAAGACTATAACCCTCGAGGTCGAATCTTCC 56825
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | ||||| ||| ||| || || ||||| || ||||| || |||
Sbjct 56824 GACACTATTGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 56765
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| ||| | |||| | ||| |||||||| ||||||| ||||| | |||||| |||
Sbjct 56764 CAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGTAGAACATTATCCGACTACAAC 56705
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTC 26978
|||||||| ||||||||| |||| ||||||
Sbjct 56704 ATTCAAAAGGAATCTACTCTCCACCTGGTC 56675
>seq15
Length=1201643
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
||||| || || || ||||| || | ||||| | ||| | ||||| ||||| ||
Sbjct 71088 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 71147
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | ||||| ||||||| ||||| ||||| || || || || ||||||||| |
Sbjct 71148 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 71207
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || || ||| | ||||| | ||||| | | ||||| ||||||||||||
Sbjct 71208 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 71267
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||| | || | ||| ||||| | ||||| ||
Sbjct 71268 GAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGG 71305
>seq12
Length=1068413
Score = 102 bits (112), Expect = 8e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| |||||| | || || || || ||||| || || | || ||| | ||| | |||||
Sbjct 493582 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATC 493641
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
||||| || || | ||||| ||||| ||||| ||||| || || || ||
Sbjct 493642 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGA 493701
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||||||||| | || | | || || ||| | ||||||| |||| | | |||||
Sbjct 493702 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTA 493761
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||||||||||| ||| | || ||||| ||||| | ||||| ||
Sbjct 493762 CAACATCCAAAAAGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 493812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662298284240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |