Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq14 158 1e-33 seq12 105 6e-18 seq15 100 2e-16 >seq14 Length=872155 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| ||||||| ||| | || ||| | || || || | | Sbjct 57112 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 57053 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| ||| ||| ||||||||||| || ||||| || ||| Sbjct 57052 GACACTATTGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 56993 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||||| | ||| |||||||| ||||||| |||| | ||||||||| Sbjct 56992 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTATAAC 56933 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||||||||| | ||||||||| | ||||||||||| || Sbjct 56932 ATTCAGAAAGAATCTACTTTGCATTTAGTGCTGAGATTGAGAGGTGG 56886 Score = 147 bits (162), Expect = 2e-30 Identities = 182/244 (75%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 23977 TTTAGCCAA-ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATC 24035 |||| | || ||| |||||| | ||||| || || || || || ||| | || || | Sbjct 57583 TTTAACTAAGACATTATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTG 57524 Query 24036 GAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGC 24095 |||||||| | || ||||| || | ||||| ||| ||| ||||||||||| Sbjct 57523 GAAGTCGAATCTTCTGATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGT 57464 Query 24096 ATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-A 24154 || ||||| || |||||||| |||||| | ||| |||||||| ||||||| |||| | Sbjct 57463 ATTCCTCCAGACCAACAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACA 57404 Query 24155 C-GTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAG 24213 | ||| | ||||||||||||| ||||||||||| | ||||||||| | |||||||||| Sbjct 57403 CTGTCTG--ATTATAACATTCAGAAAGAATCTACCTTGCATTTAGTGCTGAGATTGAGAG 57346 Query 24214 GAGG 24217 | || Sbjct 57345 GTGG 57342 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | ||||| | || ||||| | | Sbjct 57340 ATGCAGATCTTTGTCAAGACGCTGACTGGTAAGACTATTACTCTGGAGGTCGAATCTTCC 57281 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | ||||| ||| ||| || || ||||| || ||||| || ||| Sbjct 57280 GACACGATCGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 57221 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 |||||| |||||| | ||| || ||||| ||||||| ||||| ||| | | ||||| || Sbjct 57220 CAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGCAGAA-CGTTATCCGATTACAA 57162 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| || ||||| |||| || || || ||||||||||| || Sbjct 57161 TATTCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 57114 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| |||| ||||| | | Sbjct 56884 ATGCAGATCTTCGTTAAGACGCTGACTGGTAAGACTATAACCCTCGAGGTCGAATCTTCC 56825 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| ||| ||| || || ||||| || ||||| || ||| Sbjct 56824 GACACTATTGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 56765 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||||| | ||| || ||||| ||||||| |||| | ||| || ||| Sbjct 56764 CAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGTAGAACATTATCCGACTACAAC 56705 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| |||||||| | || | || ||||| ||||| || || Sbjct 56704 ATTCAAAAGGAATCTACTCTCCACCTGGTCTTAAGGTTGAGGGGTGG 56658 >seq12 Length=1068413 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || || || ||||| || || | |||||| | ||||| || | Sbjct 493582 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATC 493641 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||| || || | ||||| ||||| ||||| ||||| || || || || Sbjct 493642 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGA 493701 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| ||| |||| | | || |||||| | ||||||| ||||| | | || || Sbjct 493702 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTA 493761 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||||||||| || | || || || || ||||||||||| || Sbjct 493762 CAACATCCAAAAAGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 493812 >seq15 Length=1201643 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| || || || ||||| || | || || | ||||| || | ||||| || Sbjct 71088 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 71147 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||||| ||||| ||||| || || || || ||||| ||| || Sbjct 71148 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 71207 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || |||||| | ||||| | |||| | | || || |||||||||||| Sbjct 71208 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 71267 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || | || ||||| || ||||||||||| || Sbjct 71268 GAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGG 71305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935910922635