Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq14 129 5e-25
seq12 107 2e-18
seq15 96.9 3e-15
>seq14
Length=872155
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||||||||||||||| || || || ||||| || ||| | || || || |
Sbjct 57112 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 57053
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| ||| |||| || || ||||||| || |||||||| | || || ||
Sbjct 57052 GACACTATTG-ACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCA 56994
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|| ||| | |||| ||| || || ||| | ||||||| | ||| || | ||||||||
Sbjct 56993 ACAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTATAA 56934
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||| ||||| |||||| | ||| | ||| |||||||| |||| ||
Sbjct 56933 CATTCAGAAAGAATCTACTTTGCATTTAGTGCTGAGATTGAGAGGTGG 56886
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||||||||| || | || || |||||||| || | ||| || ||
Sbjct 57568 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 57509
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| || ||| | || || ||||||| || |||||||| | || || ||
Sbjct 57508 GATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 57449
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| || | |||| ||| || || ||| | ||||||| | ||| || | |||||||||
Sbjct 57448 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACACTGTCTGATTATAAC 57389
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| ||||| ||||| | ||| | ||| |||||||| |||| ||
Sbjct 57388 ATTCAGAAAGAATCTACCTTGCATTTAGTGCTGAGATTGAGAGGTGG 57342
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || || || || ||||| || || || || || ||| |||| || || |
Sbjct 56884 ATGCAGATCTTCGTTAAGACGCTGACTGGTAAGACTATAACCCTCGAGGTCGAATCTTCC 56825
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| ||| |||| || || ||||||| ||||| ||||| | || || ||
Sbjct 56824 GACACTATTG-ACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCA 56766
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|| ||| | |||| ||| || |||||| | ||||||| | ||| | |||| || ||
Sbjct 56765 ACAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGTAGAACATTATCCGACTACAA 56706
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515
||||||||| || |||||| | || |||| || || ||| | || || ||
Sbjct 56705 CATTCAAAAGGAATCTACTCTCCACCTGGTCTTAAGGTTGAGGGGTGGTAA 56655
>seq12
Length=1068413
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||||||||| ||||| || | || || || || |||||| | ||| || ||
Sbjct 493583 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCT 493642
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
|||||| || ||||| || || || || || || ||||| |||| |||
Sbjct 493643 TCTGACACTATT-GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGA 493701
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|| |||||| | || | ||| || || ||||| ||||||| || |||| || | || ||
Sbjct 493702 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTA 493761
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| |||||||| || ||| | || |||| ||||||||| |||| ||
Sbjct 493762 CAACATCCAAAAAGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 493812
>seq15
Length=1201643
Score = 96.9 bits (106), Expect = 3e-15
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353
||||||||| || | || || || ||||| || | ||| || || |||||| |
Sbjct 71087 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 71146
Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412
|| |||| || || ||| ||| || || ||||| |||| ||| || ||||||
Sbjct 71147 TG-ACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 71205
Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472
| || | ||| || || ||||| ||||| | | |||| || | || || ||||||||||
Sbjct 71206 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAA 71265
Query 115473 AAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||| || ||| |||| | || ||||||||| |||| ||
Sbjct 71266 AAGAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGG 71305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425343911874040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |