Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq14 107 2e-18
>seq14
Length=872155
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | ||| | |||||||||||| | || || || || |||||||| ||||| |
Sbjct 56886 CCACCTCTCAATCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGAC 56945
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || | || || || ||||| || || | || || | ||| ||||| |||||
Sbjct 56946 AGCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGA 57005
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||||||||| ||| ||| || ||||| | || | ||| |||| || || |
Sbjct 57006 ATACCTTCTTTGTC-CTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 57064
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||||| || ||||||||||| || ||||| |||||
Sbjct 57065 CTCTAGGGTTATAGTTTTGCCAGTTAGAGTTTTGACAAAAATTTGCAT 57112
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | ||| | |||||||||||| | ||| || || || |||||||| ||||| |
Sbjct 57342 CCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCAGAC 57401
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || | || || || ||||| || || | || || | ||| ||||| |||||
Sbjct 57402 AGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGA 57461
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||||||||| ||| ||| || ||||| | || | ||||| | || ||||
Sbjct 57462 ATACCTTCTTTGTC-CTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGAC 57520
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | |||||||||||| | ||| || || ||||| |||||
Sbjct 57521 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 57568
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATC-GCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096
|| || ||||||||||||||||| || | | ||| | | | || || || || || ||
Sbjct 56688 GTAGATTCCTTTTGAATGTTGTAGTCGGATAATGTTCTACCA-TCTTCCAGTTGTTTACC 56746
Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTG-CT 131155
|| | || || | ||| ||||| ||||| || ||||| || || ||| ||| || ||
Sbjct 56747 GGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATC-TTGAATTTTTGACT 56805
Query 131156 TGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAG 131215
||| | || | ||| |||| || |||| |||| ||| | || ||||| || || |
Sbjct 56806 TGACGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATAGTCTTACCAGTCAGCG 56865
Query 131216 TTTTTACGAAAATCTGCAT 131234
| || ||||| ||||||||
Sbjct 56866 TCTTAACGAAGATCTGCAT 56884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012699697280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |