Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq14 174 1e-38
seq15 138 1e-27
seq11 125 6e-24
seq12 120 3e-22
>seq14
Length=872155
Score = 174 bits (192), Expect = 1e-38
Identities = 179/229 (78%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| |||||||||||||||||| |||| ||| | ||||| || || |||
Sbjct 57568 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 57509
Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| || || || | || | ||| |||||| ||| ||||||||||| ||||| || ||||
Sbjct 57508 GATACCATTGA-TAACGTCAAGTCAAAAATTCAG-GACAAAGAAGGTATTCCTCCAGACC 57451
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||| || | ||||||||||| || ||| | ||||||| | | || || ||||| |
Sbjct 57450 AACAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACACTGTCTGATTATA 57391
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| ||||| |||||||| || | ||||||||||| || | ||||| ||
Sbjct 57390 ACATTCAGAAAGAATCTACCTTGCATTTAGTGCTGAGATTGAGAGGTGG 57342
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || ||| | || || ||| | || || | || || || || ||
Sbjct 57112 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 57053
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || | ||| |||||| ||| ||||||||||| ||||| || |||||
Sbjct 57052 GACACTATTGACAACGTCAAGTCAAAAATTCAG-GACAAAGAAGGTATTCCTCCAGACCA 56994
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| | | ||||||||||| || ||| | ||||||| | | || || ||||| ||
Sbjct 56993 ACAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTATAA 56934
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| |||||||| || | ||||||||||| || | ||||| ||
Sbjct 56933 CATTCAGAAAGAATCTACTTTGCATTTAGTGCTGAGATTGAGAGGTGG 56886
Score = 122 bits (134), Expect = 8e-23
Identities = 172/238 (72%), Gaps = 3/238 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||| ||||| | || || |||| || || || ||
Sbjct 56884 ATGCAGATCTTCGTTAAGACGCTGACTGGTAAGACTATAACCCTCGAGGTCGAATCTTCC 56825
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || | ||| |||||| ||| || || ||||| ||||| || |||||
Sbjct 56824 GACACTATTGACAACGTCAAGTCAAAAATTCAA-GATAAGGAAGGTATTCCTCCAGACCA 56766
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| | | ||||||||||| |||||| | ||||||| | | || | ||| |||||
Sbjct 56765 ACAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGTAGAACATTATCCGACTACAA 56706
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATT-ATTA 25234
|||||||| ||||| || || || | || ||||| | || || || |||| ||||
Sbjct 56705 CATTCAAAAGGAATCTACTCTCCACCTGGTCTTAAGGTTGAGGGGTGGTAATTGATTA 56648
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| |||| ||||| | || || | || || || || ||
Sbjct 57340 ATGCAGATCTTTGTCAAGACGCTGACTGGTAAGACTATTACTCTGGAGGTCGAATCTTCC 57281
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| | ||| |||||| ||| || || ||||| ||||| || |||||
Sbjct 57280 GACACGATCGACAACGTCAAGTCAAAAATTCAA-GATAAGGAAGGTATTCCTCCAGACCA 57222
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| | | ||||||||||| |||||| | ||||||| | || | |||||||||
Sbjct 57221 ACAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGCAGAACGTTATCCGATTACAA 57162
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||||| || || || || || || || | || | ||||| ||
Sbjct 57161 TATTCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 57114
>seq15
Length=1201643
Score = 138 bits (152), Expect = 1e-27
Identities = 166/221 (75%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
||||| ||||||||||| ||||| ||||||| | ||||| || || |||||||||||
Sbjct 71088 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 71147
Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124
|| || || ||| |||| | ||| ||||| ||||| || |||||||||||||| |
Sbjct 71148 GA--CAATGTCAAGTCAAAGATTCA-AGACAAGGAAGGTATCCCACCTGACCAACAAAGA 71204
Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184
| || ||||| || || ||||| ||||| | | | || || || ||||| ||||||
Sbjct 71205 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAA 71264
Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||||||| |||| ||||| | || | ||||| ||
Sbjct 71265 AAAGAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGG 71305
>seq11
Length=805821
Score = 125 bits (138), Expect = 6e-24
Identities = 161/220 (73%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||||||||| ||||| ||||||| | ||||| || || |||||||| ||
Sbjct 742944 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCTGACACCATT 742885
Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125
|| || || ||| || ||| ||||| ||||| || |||||||||||||| |
Sbjct 742884 GA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 742827
Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185
| || |||||||| || ||||| ||||| | | | ||| | || ||||| || ||||
Sbjct 742826 TGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACTTTATCTGACTACAACATCCAAA 742767
Query 25186 AAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| |||||||| ||||||| || | || ||||||| ||
Sbjct 742766 AGGAATCCACTTTACATTTGGTTTTGAGATTAAGAGGTGG 742727
>seq12
Length=1068413
Score = 120 bits (132), Expect = 3e-22
Identities = 147/199 (74%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||||| |||||||| | || || | ||||| || || |||
Sbjct 493586 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCTTCT 493645
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| || ||| ||||| ||||| || ||||||||||
Sbjct 493646 GACACTATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACC 493703
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || ||||| || || ||||| ||||||| | || || || ||||
Sbjct 493704 AACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACA 493763
Query 25177 ATATTCAAAAAGAATCCAC 25195
| || ||||||||||||||
Sbjct 493764 ACATCCAAAAAGAATCCAC 493782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327910219855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |