Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq14 107 1e-18 >seq14 Length=872155 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || | || || || || ||||| |||| ||| | | Sbjct 57340 ATGCAGATCTTTGTCAAGACGCTGACTGGTAAGACTATTACTCTGGAGGTCGAATCTTCC 57281 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | | | ||| ||||||| ||||| || ||| | ||| | ||||| Sbjct 57280 GACACGATCGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 57221 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || ||||| || |||||||| |||||| | ||| | ||||||||||| Sbjct 57220 CAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGCAGAACGTTATCCGATTACAAT 57161 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| ||||| ||||||||||| |||| || Sbjct 57160 ATTCAAAAGGAGTCTACTCTTCACTTGGTCTT 57129 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| |||| |||||||| || ||| | || ||| | | Sbjct 57112 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 57053 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | | ||| ||||||| || ||||| ||| | ||| | ||||| Sbjct 57052 GACACTATTGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 56993 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || ||||| || || ||||| |||||| | ||| || | ||||| || Sbjct 56992 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTATAAC 56933 Query 22014 ATTCAGAAGGAATCTACTCTTCAT 22037 |||||||| ||||||||| | ||| Sbjct 56932 ATTCAGAAAGAATCTACTTTGCAT 56909 Score = 95.1 bits (104), Expect = 9e-15 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 21917 AAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAA 21976 ||||||| ||||| || ||| | ||| | ||||||||||| | || ||||| || || Sbjct 56801 AAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAACAGAGATTGATTTTTGCCGGTAA 56742 Query 21977 ACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 22036 |||||| |||||| | ||| | |||| ||||| ||||| |||||||||||||| || Sbjct 56741 ACAACTGGAAGATGGTAGAACATTATCCGACTACAACATTCAAAAGGAATCTACTCTCCA 56682 Query 22037 TATGGTATTA 22046 |||| ||| Sbjct 56681 CCTGGTCTTA 56672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358124725801018