Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq10 120 6e-22 >seq10 Length=751133 Score = 120 bits (132), Expect = 6e-22 Identities = 298/445 (67%), Gaps = 8/445 (2%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || ||||| |||||||| |||||||| || || ||||| ||| ||| | ||| Sbjct 380068 CTTGCCTTTTTCGCCGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCC 380127 Query 42483 AAAGAGGTGCAGTACTTT--GAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 | || || || | || ||||| | ||||| || ||||| || || || | Sbjct 380128 ACCGAAGTTCA--AATTCCAGAGGCAAAGAGTTTCTATGGTTTCCAAATCATGATTGAAA 380185 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC 42600 | | || ||||| ||| || | || || | || |||||| ||| || || Sbjct 380186 ATATTCATTCTGAAACTTACTCCTTATTGATCGATACCTACATCAAGGACCCTAAGGAAA 380245 Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 || | ||||||| ||||| | || || || ||| ||||||| || |||| Sbjct 380246 GTGAATTCTTGTTCAATGCCATTCACACTATCCCAGAAATCGGTGAGAAGGCCGAGTGGG 380305 Query 42661 CGCTCAACTGGATCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACC 42719 | || | ||||| | || | | ||||| ||| || || || || || |||||| | Sbjct 380306 CTCTAAGATGGATTCA-AGACGCTGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCT 380364 Query 42720 GCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-A 42778 | |||| || |||||||||| || ||||||||||||| |||||| | ||| ||| | Sbjct 380365 TCTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGA 380424 Query 42779 GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCA 42838 ||| | |||||| || | |||||||| |||||| | || |||| ||||| || |||| Sbjct 380425 GGTAT-GATGCCAGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCA 380483 Query 42839 TAGGGACTTTGCCTGCCTCCTGTTC 42863 | |||||||| ||| | ||||| Sbjct 380484 CACCGACTTTGCATGCTTATTGTTC 380508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338999327920