Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq15 98.7 9e-16 >seq15 Length=1201643 Score = 98.7 bits (108), Expect = 9e-16 Identities = 273/420 (65%), Gaps = 29/420 (7%) Strand=Plus/Plus Query 20198 TGGGCATCTCCCAACGTGTGAATAAACTCCCCGGG-TCTAAGACCAGTAACATGAGCAAG 20256 || ||||| |||| || ||||||||||| || || || | | | | ||| | ||||| Sbjct 565315 TGTGCATCCCCCAGAGTATGAATAAACTCACCTGGCTCCATGTCGAC-AACTTTAGCAAT 565373 Query 20257 CATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCC 20316 ||| ||| || || | ||| ||||| ||||| || || ||||| |||||||| | Sbjct 565374 CATTCTAGTCAACAGAGCATATGATGCAATATTAAATGGTACGCCCAACCCCATGTCACA 565433 Query 20317 CGACCTCTGATACAGCTGACAGGAAAGCT---------CA---CCGTCAGCT-------- 20356 || | || || | | ||| ||||| | || ||||| || Sbjct 565434 AGAACGTTGGTATAACAAACATGAAAGGTGGGGCTTACCAGATCCGTCTCCTTCTTTGGG 565493 Query 20357 -------ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTC 20409 ||||||||||| | || | ||| || || || | |||||| || || Sbjct 565494 GAAACTGACATAAAATTGTGAGAAAATGTGGCATGGTGGCAAAGCCATCTTGTCAAAATC 565553 Query 20410 CGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATC 20469 || |||||||| |||| |||||| ||||||||||| | ||||| | |||| | || Sbjct 565554 AGCTGGGTTCCAAGCACTCATAATAATTCTTCTATCATAAGGATTTGTCTTTAGTTTATG 565613 Query 20470 CACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTA 20529 | | | | |||||| |||| ||||| || | |||||| |||| | | ||| Sbjct 565614 AATGACCTGCTTCAATTGATCAATACCCTGTCCAGCATAGTCGTCATCACAGGTCTTGTA 565673 Query 20530 CGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCT 20589 || || || |||||||| ||||| || ||||| || || ||||||||| | |||| Sbjct 565674 TTTAGCACCGAAATGCCTCCATTGGAATCCATAAACGGGCCCTAAATCCCCCACTTTTCT 565733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372706208280