Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq14 114 1e-20 seq15 87.8 2e-12 seq11 86.0 6e-12 >seq14 Length=872155 Score = 114 bits (126), Expect = 1e-20 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | |||||||||||||| ||||| ||| Sbjct 57114 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATATTGTAATCGGAT 57173 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || | || || ||||||||||||| | | || | | ||||||||| ||||| Sbjct 57174 AACGTTCTGCCA-TCTTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGG 57232 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 |||||||| || || ||| |||||| || | ||| || | ||||||| || || Sbjct 57233 AATACCTTCCTTATC-TTGAATTTTTGACTTGACGTTG-TCGATCGTGTCGGAAGATTCG 57290 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || ||||||||||| || || ||||| |||||||| Sbjct 57291 ACCTCCAGAGTAATAGTCTTACCAGTCAGCGTCTTGACAAAGATCTGCAT 57340 Score = 111 bits (122), Expect = 2e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | || |||||||| | | || || || |||||||| || || | Sbjct 56886 CCACCTCTCAATCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGAC 56945 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || ||||| ||||||| | | || | | ||||||||| ||||| Sbjct 56946 AGCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGA 57005 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||||||||| ||| |||||| || | ||| || | ||||||| || || | Sbjct 57006 ATACCTTCTTTGTC-CTGAATTTTTGACTTGACGTTG-TCAATAGTGTCGGAAGATTCAA 57063 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | ||||| ||||| |||||||| |||||||| ||||| Sbjct 57064 CCTCTAGGGTTATAGTTTTGCCAGTTAGAGTTTTGACAAAAATTTGCAT 57112 Score = 109 bits (120), Expect = 5e-19 Identities = 144/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||||||||||||||||||| | || | || || ||||||||||||| | Sbjct 56691 GATTCCTTTTGAATGTTGTAGTCGGATAATGTTCTACCATCTTCCAGTTGTTTACCGGCA 56750 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || | | ||||||||| ||||| |||||||| || || ||| |||||| || | Sbjct 56751 AAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATC-TTGAATTTTTGACTTGAC 56809 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||||| || || ||||||| || | || ||||||||||| || | Sbjct 56810 GTTG-TCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATAGTCTTACCAGTCAGCGTCT 56868 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 56869 TAACGAAGATCTGCAT 56884 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | || |||||||| | | | || || || |||||||| || || | Sbjct 57342 CCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCAGAC 57401 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || ||||| ||||||| | | || | | ||||||||| ||||| Sbjct 57402 AGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGA 57461 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| |||||| || | | || | ||| || | || || || Sbjct 57462 ATACCTTCTTTGTC-CTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGAC 57520 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||| |||| ||| || |||||||| ||||| Sbjct 57521 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 57568 >seq15 Length=1201643 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| ||||| |||| | || || ||||||||||||||||| | Sbjct 71305 CCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 71246 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || | ||| ||||| | | |||| | | |||||||| || || Sbjct 71245 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 71186 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | |||| || |||| || | ||||| | || || | Sbjct 71185 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 71128 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606 | || | || | || |||||||||| ||| || |||||| Sbjct 71127 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 71087 >seq11 Length=805821 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | |||||| ||||||| | || |||||||| ||||||||||| Sbjct 742727 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 742786 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || | ||| ||||||| | |||| | | |||||||| || || Sbjct 742787 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGG 742846 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| || || | |||| || | |||||| | || || || Sbjct 742847 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTG-TCAATGGTGTCAGAAGATTCAAC 742905 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605 || | || | || |||||||||| ||| || || || Sbjct 742906 TTCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 742944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262294544240